Aphis gossypii (cotton aphid): 114123240
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Entry
114123240 CDS
T05869
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114123240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114123240
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114123240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
Motif
Other DBs
NCBI-GeneID:
114123240
NCBI-ProteinID:
XP_027841944
LinkDB
All DBs
Position
1:complement(3020745..3027856)
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AA seq
729 aa
AA seq
DB search
METAVEEYPPVNWGNEKLEEAQDSVNENPWDVESWAILLREAQTRWINDVRSFFEKLVTT
FPTSGRYWKYYIEMEMRGRNFEKVEKLFQRCLVKVLNIELWKLYLAYVKETKALLPTYKE
KMAQAYDFALDKIGMDIHSHNIWQDYITFLSSVEAVGSYAENQKITAIRKVYQRGVVNPM
INIELLWKEYLAFEQSINIMIADKMMIERSRDYMNARRVTKEYEVVIRGLNKNYPSVPPT
GNLDEMKQVELWKKYIIWEKANPLNTEDTALITRRVMFAFDQALLCMTHHPDFWYEAAQF
LDGSSKILSEKGDISAAKQYSDEAANVYERAIGTVLNTSMLLRFAYADFEEGRMNYEKVH
SIYKSYLENEITTDPTLTYVQYMKFARRAEGIKSARAVFKKAREDPRSKYHVYVSAALME
YYCSKDKNIAFRIFELGLKKYCDNPQYIISYIDYLSHLNEDNNTRVLFERVLSNTSLEPE
KSVDIWNRFLEFESNIGDLSSILKVEKRRSAVFGKLVEFEGKETAQLVDRYRFLNLFPCT
SPELRSIGYNEVTNTVSKTMHNSIQRSAVIDGLDDLDNRPNEKRLPLPDISQMVPYKPKL
NAFPGEHIVPGGTFPPPPPACQLMQVLPPPGCFHGPFVSVDMLMDIFLRLILPDKAPMPK
ADNGCDVKLFDTAMSVQWANEDTAHGGSNKKKRRIGGLSGKGDDSDEDINLVPPPFDIYR
SRQQKRVSK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagccgtcgaagaatatccgccagtaaattggggtaatgaaaaattggaagaa
gctcaggattcggtcaacgaaaatccatgggacgtagagtcgtgggctatacttttgcgt
gaagcacagactcgatggatcaacgatgtacgttcgttttttgaaaaacttgtcactaca
tttccaacttctggtcgttactggaagtattatatcgaaatggaaatgcgtggacggaat
ttcgaaaaagtcgagaagctctttcaacgttgtcttgtcaaagtacttaatattgaactg
tggaaactttatctagcttatgttaaagagactaaagcacttttaccaacttacaaagag
aaaatggctcaagcatatgattttgcattggataaaattggcatggatatacattcacat
aacatttggcaagattatataacctttttaagtagtgttgaagcagttggttcatatgct
gaaaatcaaaaaataacagcaatcagaaaagtctatcaacgtggtgttgtaaatcctatg
attaacattgaattgttatggaaagagtatctggcttttgaacaaagtattaatattatg
attgctgataagatgatgattgaacgaagtagagattatatgaatgccaggagagtcacc
aaagagtatgaggtagttataagaggactgaataagaattatcctagtgtacctccaact
ggtaacctagatgagatgaaacaagtagaattgtggaaaaaatatattatctgggaaaaa
gcaaaccctttaaatactgaagacactgcactgattacaagacgagttatgtttgctttt
gaccaagcactattgtgtatgacccatcatcctgacttttggtatgaagctgctcagttt
ttagatggaagttctaaaattctctctgaaaaaggagatatatcagcagctaaacagtat
agtgatgaagcagctaatgtttatgaaagagcaattggtactgtattaaatacaagtatg
ttattacgttttgcttatgctgattttgaagaaggtcgcatgaattatgaaaaagttcat
agtatttataaaagttatttagaaaacgaaattactactgatccaaccctgacatatgta
caatatatgaaatttgctcgtcgtgctgaaggaattaaatctgcacgagcagttttcaaa
aaagctagagaagaccctagatctaaataccatgtctatgtttctgctgcattaatggaa
tattactgtagtaaagacaaaaacattgcttttcgtatttttgagcttggattaaaaaag
tattgcgataatcctcagtatattattagttatatagattatctttctcatctcaatgag
gataataatacaagggtgttatttgagagagttctatcaaatacaagtcttgaaccagaa
aaatctgtagatatttggaatcgattccttgaatttgaatcaaatataggagatttgtca
agcatattgaaagtagaaaaacgacgatcagctgtttttggcaagctagtagaatttgaa
ggaaaagaaacagcacaacttgtggacagatataggtttttaaacctatttccatgtaca
agtcctgaattgagatctattggttataatgaagttactaatacagtatctaaaaccatg
cataattccattcaaagatctgctgttatcgatgggttagatgacttagataatcgacct
aatgaaaagcgattgccgttgccagatatttctcaaatggtaccttataaaccaaaattg
aatgcttttccaggcgaacatattgtaccaggaggaacgtttccaccgcctccacctgct
tgccagctaatgcaagtattaccaccacctggttgtttccatggtccatttgtatctgta
gacatgcttatggatattttccttagacttatacttcctgataaagcaccaatgccgaaa
gctgataatggatgtgatgtgaaattatttgacactgctatgtcagtgcaatgggcgaat
gaagatacagcacatggtggctccaataaaaaaaaacgtagaataggaggactatctggt
aaaggagatgacagtgatgaagatattaacttagtaccaccaccatttgatatatatcgt
tcaagacaacaaaagcgtgtgtccaaataa
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