Aphis gossypii (cotton aphid): 114123398
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Entry
114123398 CDS
T05869
Name
(RefSeq) transcriptional repressor CTCFL-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ags03000
]
114123398
03036 Chromosome and associated proteins [BR:
ags03036
]
114123398
Transcription factors [BR:
ags03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114123398
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114123398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
114123398
NCBI-ProteinID:
XP_027842149
LinkDB
All DBs
Position
1:complement(33974673..33982823)
Genome browser
AA seq
689 aa
AA seq
DB search
MYLIDKTTTMSENEGTTIVLDGGSSANTMTIDGTHIKLEASTSGNENITDIQNYLDSFNK
EIEGNEVTQVQTDGDSVEHAYFIDQNVQYYYQTTTGDGQMVMVGGLSEHDAQMMAETNDN
NMDNVTQIVLPNVQDKIKKDIPQIVALGDGSGYQTVTLVQSDAEANNYVLYVVKQQNDKN
DETSNVMDIQQEHDPDDPDASNVYDFNDGEDPTLPKKQEIEDSGEEDDKSKIVKLVPKKS
QTVTQAHMCNYCNYTTGKRYLLSRHMKSHSKERPHKCTVCERGFKTLTSLQNHVNTHTGT
KPYQCRSCPSAFTTSGELVRHVRYKHTHEKPHKCTICDYASVELSKMRNHMRCHTGERPY
QCPHCTYASPDTFKLKRHLRIHTGEKPYECDICFSRFTQSNSLKTHRLIHSGEKPVFKCD
HCPATCGRKTDLRIHVQKLHTSDKPIKCKRCGDAFPDRYQYKVHCKSHEGEKCYKCELCP
YASMSQRHLETHMLIHTDEKPFHCKQCDQSFRQKQLLRRHHNLYHNPAYIPPPPHAKTHQ
CNTCQRSFRHKGNLLRHMEVHMQESTGNDRNTAIKQRLEYTDSANEDESEEDTSIPTSET
GVVAVEGEDGQQYVVLEVIQLDGQDQIGSYSSSNVSIQQVDQSSSPSQKDLTILKTASLS
DVKEECGDGVENCFGFDDEDDEETTNSGG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaattgacaagactacaaccatgtctgaaaacgaaggaacaactattgtatta
gatggtggatcatctgcaaatactatgactattgatgggactcacataaagttggaggct
tcaacctctggcaatgaaaatataactgatatacaaaattacctggattcatttaataaa
gaaattgaaggaaatgaagtaacacaagtacaaactgatggggactcagtagaacatgca
tattttattgatcaaaatgtccaatattattatcaaacaactacaggcgatggccagatg
gttatggtcggaggactttcagaacatgatgcacaaatgatggctgagacaaatgacaat
aatatggataatgtcactcaaattgttctgcctaatgttcaagataaaattaaaaaagat
atccctcaaattgttgctttaggagatggtagtggatatcaaacagtaactcttgttcaa
tctgatgctgaagccaacaattatgtactttatgtagtaaaacaacaaaatgacaaaaat
gatgaaacttcaaatgttatggacatacaacaagaacatgatccagatgatcctgatgct
agcaatgtatatgatttcaatgatggggaagacccaactttaccaaaaaaacaagaaata
gaagattcgggtgaagaagatgacaaatctaaaatagttaaattagtacctaaaaagtca
caaactgtaactcaagcacatatgtgtaactattgtaattataccactggaaaaagatat
ttgttgtctcgtcatatgaagtctcattctaaagaacgtcctcataagtgtactgtttgt
gaacgtggtttcaaaactcttacttcattgcaaaatcatgtgaatactcatactggaaca
aaaccatatcaatgtcgaagttgtccaagtgcttttactacatcaggagaacttgttaga
catgttcggtataagcatactcatgaaaaaccacataaatgtacaatatgtgattatgct
agtgtagaacttagcaaaatgagaaatcatatgagatgtcatactggtgaaagaccatac
caatgtccccattgtacttatgcaagtccagatacatttaaattaaagcgccatttgcgc
atacacactggtgagaaaccatatgagtgtgacatttgtttttctagatttacccaatcc
aacagtttaaaaacacacagattaatacatagtggtgaaaagcctgtatttaaatgtgat
cattgtccagcgacttgtggacgaaaaactgatttacgtatacatgtacaaaagcttcat
acttctgataaacctattaagtgtaaacgatgtggtgatgcatttcctgatcgttaccag
tataaggttcattgtaaatcacacgaaggggaaaaatgttataaatgtgaactgtgccct
tatgcttccatgtctcagcgtcatcttgaaactcatatgttaatacatacagatgaaaaa
ccattccattgtaaacaatgtgatcagtcgttcagacaaaaacaattattacgccgccat
cataatttgtatcataatccagcatatataccacctccaccacatgccaaaactcatcag
tgtaatacatgtcaacgatcatttagacataaaggaaatttattaagacatatggaagtc
catatgcaagaatcaactgggaatgatcgaaatacagcaataaaacaaagacttgagtat
acagattcagctaatgaggatgaatctgaagaagacacaagtattccaacaagtgaaact
ggagttgttgcagtagaaggtgaagatggacagcaatatgtcgtacttgaagtgattcaa
cttgatggtcaagatcagataggtagttactcatcttcaaatgtatcgatacaacaagtt
gaccaatcttcctcaccaagtcaaaaagaccttacaattttaaaaaccgcatctttgtca
gatgtgaaagaagaatgtggtgatggtgttgaaaattgttttggttttgatgacgaagat
gatgaagaaacaacaaactcaggtggttaa
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