Aphis gossypii (cotton aphid): 114123405
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Entry
114123405 CDS
T05869
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114123405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ags03009
]
114123405
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114123405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
PROPPIN
EPTP
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR35_2nd
SGL
Beta-prop_SCAP
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
114123405
NCBI-ProteinID:
XP_027842161
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Position
1:33957867..33963804
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AA seq
413 aa
AA seq
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MNKSKTIDYLEENSNSENKLKRAWRDEDDTNSNKEQRKLLKQKYVGIVGKPKWAKITKDQ
SKKVSLDDEDEDLDLLKYSGNLARTKKGVNLAKGLIGIKKLHNLNLSTSSCGKIVKSVEF
HPTSSLALIAGISGRASIVQVDGFKNEKLQSIKFQKFAIDCAHFTVDGKQFVAGSRTQRN
FYCYDLMEGRSMFVPVHHNIGQTRMDNFCMSPDGKLIASCGKFGEIHLFTAKSKEWITTL
KMNGAANALTFTNDGKRMYSFGENGEIYEWDMNSRTCIKKFMDDGCLQGTSLALSGDNQY
LAAGSSSGVVNLYKLPCDVNPKPDKTILNLVTTVSKLSFNKNSDILAMVSNQKNDAIKLL
HVPSKTVFSNFPTTSDNVGKINCVDFSPNSGYLGLANNKSEALLYRLTHFENY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctaaaacgattgattatctagaagaaaactcaaatagtgaaaataaattg
aaacgagcatggcgagatgaggatgacacaaattccaacaaagaacagagaaaactgtta
aaacaaaagtatgttggaattgttggtaaaccaaaatgggccaaaatcactaaagatcag
tcaaaaaaagtatcactagatgatgaagatgaagatttggatttgctcaaatacagtggt
aatttagctcgtacaaaaaaaggagtaaatttggctaaaggtttgattggtataaaaaaa
ttacacaatttaaatttgtccacatcatcttgtggaaaaattgttaagtcagtagaattc
catcctacatccagtttagcattaattgctggtatatcaggaagagcttcaattgtacag
gttgatggatttaaaaatgaaaaattacaatctattaaatttcaaaaatttgctattgac
tgtgcacattttactgttgatggaaaacaatttgtagctggttctaggacacaaagaaat
ttttattgctatgatttaatggaaggaaggtcaatgtttgttcctgttcaccataatatt
ggacaaacaagaatggataacttttgtatgtcacctgatggaaaattaatagcttcttgt
ggcaagtttggtgaaattcacttgtttactgctaaaagcaaagaatggataaccacattg
aagatgaatggtgcagcaaatgcccttacttttaccaatgatgggaagagaatgtattcc
tttggagaaaatggtgaaatttatgaatgggatatgaatagtcgaacgtgtataaagaaa
tttatggatgatggctgtctccaaggaactagcttagcactatcaggagacaatcagtat
ttggcagctggctcatcatcgggtgttgttaatttatataaattaccatgtgatgtaaat
ccaaagccagataaaaccattttaaacttggtgacgactgtttcaaaattaagcttcaac
aaaaattcagatattttagctatggtttctaatcaaaagaacgatgctattaaattgttg
catgttccatccaaaacagtgttttctaatttccctacaacatccgataacgttggaaaa
attaattgtgtagatttttcacccaacagtggataccttggtttagcaaataataaatca
gaagctttactatatagattgacacatttcgaaaactactag
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