Aphis gossypii (cotton aphid): 114123774
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Entry
114123774 CDS
T05869
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114123774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114123774
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114123774
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114123774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114123774
NCBI-ProteinID:
XP_027842657
LinkDB
All DBs
Position
3:complement(6273612..6281273)
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AA seq
693 aa
AA seq
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MYKSIKHNMKGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRL
RDQIKSWIASAEIKDKSALLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQ
KEREEISAWLTQSIESLNIQIDQYECEMESLLVGKKKRLDKDKQEKLDELKARVERHRFH
IRKLETVLRMLDNMSVEVKKIRSIKDDVEYYIEASHEEDFMHNDDLYDEIIGLAELELGV
AANNSAEANGSPTSQTASLSGSCPASPAPMSHNHSIEEPVSVAVITTSTPVSITTIATIS
ESIPMISAVSTVVTTATSASIVAAPVRKKKEETTKNTIKPTPVKANPSINANTTVNSKGP
TIAAVVKSSVNNHITTTSSVSTVSQSITTQTSTTTVGNFATVAASNIHNKHAPQSVENTS
VVTSIPTSPSSYHTNVSTAQGNVNNSDNVVNCVSTTPSSLSSTTSPVQVDSHTPLSSLKT
IAQKAVDQAGIDISQQSTDNKSLSSSIVQNSSSHLSLQQQPSQQAPVLFEATISPLLGVA
PLGPVPLSKDHQFQFTMLESAFVHLPHPSDSERIKLYLPRNPCSTPHYYNQGPLPHSDSL
EFFQRLSTESLFFIFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKLINEEYE
QGTYIYFDYEKWGQRKKEGFTFEYKYLEDRELN
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaatcaataaaacacaatatgaaaggtgaaattgatcggtgccttaagaaagtt
accgaaggtgttgagacatttgaggacatttggcaaaaagttcataatgctacaaatagt
aatcaaaaagaaaagtatgaggctgacctcaaaaaggaaatcaagaaattgcaaaggtta
cgcgatcaaatcaaaagctggattgcgtccgcagaaattaaggataaaagtgcattactt
gattaccgaaaacttatagaaactcaaatggaaaggtttaaagtagtcgaacgagaaaca
aagactaaagcttattctaaagaaggtttgggtgctgcccaaaaattagatcctgctcaa
aaagaaagagaagaaataagtgcatggttaacacaatcaattgagtcgctcaatattcaa
attgaccaatatgaatgtgaaatggagtcattacttgttgggaagaaaaaaagattggac
aaggataaacaagaaaaactagatgaacttaaagcaagagtagaacgacataggttccat
atacgaaaattagagactgtactaagaatgttagataatatgtcagtggaagtcaaaaag
attcggtcaataaaagatgatgtagaatattatattgaagcatcacatgaagaggatttt
atgcataatgatgatttgtatgatgaaataattgggttagctgaacttgaattaggagtt
gctgcaaataattctgcagaagcaaatggttcacccactagccaaactgcaagtcttagt
ggttcttgtccagcatcacctgctccaatgtcacacaatcattccatcgaagagccagtt
tcagtggctgtaataacaacttctacaccagtatcaataacaactattgctacaatcagt
gaatcaattccaatgatctctgcagtatctacagttgtaactactgctacttcagcttct
attgttgcagcgccagttcgtaagaaaaaagaagaaactactaaaaatacaattaaacca
actcctgtgaaagcaaatccttcaattaatgctaatactacggtgaacagtaaaggtcca
actatagctgctgttgtaaaatcatctgttaataatcatattaccacgacatccagtgtg
tctactgtgtctcaatctataactactcaaacaagtactactactgttggtaattttgca
actgtagcagcttcaaatattcataataagcatgccccacaatctgttgaaaatacgtct
gttgtcacgtctataccaacttctccatcatcgtaccatacaaatgtatcaactgcccaa
ggaaatgtgaataattctgataatgtggtaaattgtgtgtctactacaccttcgtcatta
agttctacaacatcaccagtacaagtggattctcacacacctctgtcttcattaaagact
attgcccaaaaagctgttgatcaagctgggattgatatatcacaacagtctacagataat
aaaagtttgagttcaagcatagttcaaaattcaagtagtcatctaagcttacagcaacaa
ccatcacaacaggcacctgttttgtttgaagctacaatttctcctttattaggagtagct
ccactaggtccagtgccactttctaaagaccaccaatttcaatttacaatgcttgagtcc
gcttttgtacatttacctcatccgtcagattctgaacgaataaagttatatttacctcga
aatccatgttcaacacctcattattataatcaaggacctctccctcattcagatagttta
gaatttttccagaggctttcaacagaatcccttttttttatattctattacatggagggg
tctaaagcacagtatttagctgctaaggcattaaaaaaacaaagttggagattccataca
aaatatatgatgtggtttcagcgacacgaagaacctaaattaattaatgaagaatatgaa
cagggcacatacatctattttgactatgaaaaatggggtcaacggaaaaaagaaggcttt
acgttcgagtataagtatctagaagatagagaattaaattga
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