Aphis gossypii (cotton aphid): 114123891
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Entry
114123891 CDS
T05869
Name
(RefSeq) ribonuclease ZC3H12A-like isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114123891
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114123891
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
zf-CCCH_4
zf-CCCH_2
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
114123891
NCBI-ProteinID:
XP_050060545
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All DBs
Position
3:16257412..16273038
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AA seq
647 aa
AA seq
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MDHAGPLSPTTASNATLSVDSSKGRLVVDRIDSIRNLFGCELRIVRGGSDTSAAVVFAVT
KLDEYDGKAPDDHLIDRLKCYVDSLDELQLQTLDECSNDDSSYDSDFGGDDDTSSSQHFG
GHHDISRTTSDTLGAEYADYVSAAAYKSRVDFALKLGYTERLVQTAISKLGPEPTQDQLL
AELIKLGAQCGHKLHCESDGEEAQSNNSNDSLLSPQPPKLRHVVIDGSNVAMSHGNKETF
SCRGIKICVDWFRMRGHTDITVFVPKWRKEASRPDNRRIIDQDILTELERARMLVFTPSR
EIGGKRMVCYDDRYILRLASELDGVVVSNDNYRDLANESPAFRSVVQNNILMYSFVNDRF
MPPDDPLGRSGPTLDVFLRSKAPGVGLTAVSSETCPYGKKCTYGNKCKFSHPERGLQPVK
SVTERLMEHAQRQGSAGGRQIKGKSVSLPLQQSGSGNNQQKKPLTRTMSNVPPPTTGTAH
PTTHHHPHWMGGGGGAWTTTPPPSGSNSAAVQYCGRANPAESSDPEPDCGGNLHHKLQRQ
LTLNPTYDPRLVHLRQSQHCNVTRIASAPPVPVQHHQPPMNLPPHTVAASCSDPQIFPGY
HEARQKLYYHLASIFPEEQVSAAMQYYPNETNPQKICAAILNMFSKT
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgcaggaccactgtcgccaaccaccgcctccaacgcgacactgtcggtggac
agttccaagggtcgtctggtggtcgatcggatagactccatcaggaacctgttcgggtgt
gagctgcggatcgtccgcggtggtagtgatacgtccgcggcggtggtttttgccgtcacc
aagttggacgaatacgatggcaaggcaccggacgatcatttgatcgatcggttaaagtgt
tacgtggactcgttggacgaactgcagctgcagacactggatgagtgcagcaatgacgat
tcgagttatgactcggactttggcggcgacgatgacactagcagcagtcagcactttggt
ggccatcacgacatcagccgtaccacgtcggatacgctcggtgccgagtacgcggattac
gtgagcgcggccgcgtataaatcgagagtggactttgcgcttaagctcggttacaccgaa
cgtttggtgcagacagcaatcagcaagctgggcccggaacccacgcaagatcaactgtta
gcagaattgatcaagctcggtgcgcaatgtggtcacaaattgcactgcgagtcggacggc
gaagaagctcagtcaaataactctaacgactcgctactcagtcctcaaccgcctaaactt
cggcatgtcgtcatcgatggcagcaacgtcgctatgagccacggaaacaaagagacgttc
tcgtgtcgaggcatcaaaatctgcgtcgattggttccggatgagaggtcatacagacatc
acggtgtttgtgccaaagtggcgaaaagaagcttcgaggcccgacaataggaggattatc
gaccaagatatcctgacggaattggaacgcgccaggatgttggttttcaccccttccaga
gagatcggcggtaagcgcatggtgtgctacgacgatcggtacattctgcggttggcctcg
gaactcgacggcgtcgtcgtatcgaacgacaactatcgagatctggccaacgagagtccg
gcgttccgttcggtcgtccaaaacaacatactcatgtattctttcgtcaacgacaggttc
atgccgccggacgatccgctgggccgttcgggtcccaccctcgacgtgtttctccggagc
aaagcgccgggcgtcggtctgacggccgtcagctcggagacctgtccgtacggcaaaaag
tgcacgtacggcaacaagtgcaagttcagccaccccgagcgcggtctgcagcccgtcaag
tccgtcaccgagcggctgatggagcacgcccagcgacagggctcggccggtggccgacag
atcaagggcaagtcggtcagtctgccgctgcagcagtccggctccggcaacaaccagcag
aagaagccgctgacccggaccatgtccaacgtcccgccgccgacgaccggcaccgcccac
ccgacgacccatcaccacccacattggatgggcggcggcggcggagcgtggacgacgact
ccgccgccgagcggctcgaacagcgcggcggtgcagtactgcggcagggccaatcccgcg
gagtcgtccgatcccgagccggactgcggcggcaacttacatcacaagttgcagcggcaa
ctgacgctgaacccgacctacgacccgcggctggtgcacctgcggcagagccagcactgc
aacgtgacgcgaatagcgtccgctccgcccgtgcccgttcagcaccaccagccgccgatg
aacttgccgccgcacacggtggcggccagctgttcggacccgcagatatttcccgggtac
cacgaggccaggcaaaagctgtactaccatctggcgtccatattcccggaggaacaggtg
tcggcggccatgcagtactacccgaacgagaccaatccccagaagatttgcgcggccatc
ctgaacatgttctcgaaaacgtga
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