KEGG   Aphis gossypii (cotton aphid): 114123989
Entry
114123989         CDS       T05869                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114123989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ags03019]
    114123989
   03036 Chromosome and associated proteins [BR:ags03036]
    114123989
Messenger RNA biogenesis [BR:ags03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     114123989
Chromosome and associated proteins [BR:ags03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     114123989
    COMPASS/SET1 complex (yeast)
     114123989
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_Nup120_160 WD_LRWD1 WD40_RFWD3 Beta-prop_NUP159_NUP214 DUF6731 MIOS_WD40 DUF6476
Other DBs
NCBI-GeneID: 114123989
NCBI-ProteinID: XP_027842947
LinkDB
Position
2:complement(80858512..80865042)
AA seq 322 aa
MGAKMKLVDNVVRSFQVAKVFRENTDKINSFDFSPAGDYIISCSEDDQIVIYDSQKGELS
KTINSKKYGVDLIHFAHTKTTAIHSSTKVDDTIRYLSLHDNKYIRYFTGHAKKVVSLCVS
PIEDMFVSGSLDKSLRLWDLRSPNCQGYINVMGRPVAAFDPDGLVLAAGVNSETLKLFDV
RSFDKGPFITVKLPQEKECDWTDLKFSQDGRTILIPTNGSLIRLVNSFNGTPIQTFTGHL
NNKGLAIEASFSPDSQYIFSGSTDGRIHVWNAVTGYKVCVLNGDHPGPVHCVKFNPKYMM
MASACTNMAFWLPSTTEAANLA
NT seq 969 nt   +upstreamnt  +downstreamnt
atgggtgccaagatgaagctggtcgacaacgtcgtgcgcagcttccaggttgctaaagtg
ttccgcgagaacaccgacaagatcaacagcttcgacttttcgcctgccggtgattacatc
atatcgtgcagcgaagacgaccagatcgttatatacgatagtcagaagggcgagctgtcc
aagactatcaacagcaagaaatatggcgtcgatctcattcatttcgcacacactaagact
actgctatacacagttcgaccaaagtcgatgatactatcagatatttatcattacatgat
aataagtacattcgttatttcacgggacatgccaaaaaagttgtgtcattatgtgtgtcc
cccattgaggacatgtttgtgtctggatcattggacaaaagtctcagattatgggatttg
aggtctccaaactgtcaaggttatatcaatgttatgggcagaccagtagcagctttcgat
ccagatggtttggtattggctgctggtgttaattctgaaactctgaaactgtttgatgtt
aggtcatttgacaaagggccgttcataactgtgaagcttcctcaggagaaagaatgtgac
tggactgacctcaaattcagtcaggatggccgaactatactcattcctactaatggatct
ttaattagattggtaaattcatttaatggaacaccgattcagacatttactggtcacttg
aataataaaggtcttgctatcgaagcttcattcagtccagattctcaatacatattcagc
ggatcaactgatggtcgtattcatgtatggaacgcagttactggttataaagtttgtgtt
ctcaatggagatcatccaggcccagtacattgtgttaaatttaatcctaaatacatgatg
atggcctctgcatgtacaaatatggcattttggttaccttcaactactgaagcagccaat
ttggcataa

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