Aphis gossypii (cotton aphid): 114124222
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Entry
114124222 CDS
T05869
Name
(RefSeq) ATP-dependent RNA helicase vasa-like
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ags03036
]
114124222
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114124222
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Gene silencing
piRNA pathway
114124222
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114124222
NCBI-ProteinID:
XP_027843212
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Position
X:40503506..40506882
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AA seq
588 aa
AA seq
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MDSLISKNENISNPRGRGRGFLLKMINQRQSSEKSVILPSSVLPIKNMKNNVENTSNVEN
MSNVEMTRNVENMSNVENMSNVEMTRNVENKSSVENTVVHNQSIIKKSSFQDYDYNNEKP
VRSTYIPPELNENDESIYDDGITSGINFEKFNDIEVKVNGKNIPEAIESFETLKNIPEKL
MENIKMCKFVKPTPIQKYSIPIILSGKDLMATAQTGSGKTVAYVLPIILKLLMDPKKLVK
DSNHSEPQVVIMAPTRELAVQIKLVVLKLTRLTGISSYVCYGGTLVSYQKNKILEGCHIL
VATPGRINEFVQHGFITFSSVRFFVLDEVDRMLDVDSKPDIDKILNHFSMPSVMHRQTIM
LSATLPDETQHLAKFYLNKNYLFLAVGIISSASQDIKQTFYMVNRLNKRKMLFNILEKDP
VGTIVFVKYKWTADFLATYLSEKQIPSTSIHGDRLQDQREIALNDFRINKMNVLVATTVA
SRGLDIKCVNHVINYDMPQEIEEYVQRIGRTGRLGNRGIATSFFDPDEDYLLVDPLIKTL
VSANQEIPHWLVKLRRESLCNDDNDDLNKFGGSDIRMITDSVDECEDW
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggattctctcatttctaaaaatgaaaatatttccaatccccgtggccgaggacgaggc
tttttactaaaaatgataaatcaaagacagagttctgaaaaatctgtaattttaccttca
tcggtattaccgataaaaaatatgaaaaacaatgttgaaaatacgagtaatgttgaaaat
atgagcaatgttgaaatgacgagaaatgttgaaaatatgagtaatgttgaaaatatgagc
aatgttgaaatgacgagaaatgttgaaaataagagcagtgttgaaaatactgttgtacat
aaccaaagcatcattaaaaaatctagttttcaagactatgattacaataatgaaaaacct
gtaagatcaacttatattccacctgaactcaatgaaaacgacgaatctatttatgatgat
ggaatcacttctggaataaattttgaaaaatttaatgacattgaagtaaaggtgaatggt
aaaaatatacctgaagctattgaaagttttgaaacattaaaaaatattccagaaaagcta
atggagaatattaaaatgtgtaaatttgtgaaaccaactcctattcaaaaatattctatt
ccaattattttgtctggtaaagacttgatggccactgcacaaactggttcaggaaaaacg
gttgcttatgtcttaccaatcatattaaaactactcatggatccaaaaaaactagtaaaa
gatagtaatcatagtgaacctcaagttgttataatggcacctacgagagaattggctgtt
caaattaaattggttgttttaaaattaacaagacttactggaatttcatcatatgtctgt
tatggtggtactttagtcagttatcaaaaaaataaaattcttgaaggttgtcatatactt
gtagccacacctggtagaattaatgaatttgttcagcatggtttcataacattttcatct
gtgagattttttgttttggatgaagttgataggatgttagatgtagactcaaaaccagat
attgataaaattttaaatcatttttcaatgccatctgttatgcatagacaaacaattatg
ttgtcagcaactttaccagatgaaactcagcatttagcaaaattctatttaaataaaaat
tatttatttttagcagttggtattattagtagcgcttcacaagatataaaacaaaccttt
tacatggttaatagacttaataaacgtaaaatgttattcaatattttggaaaaagatcca
gtaggaactatagtgtttgtaaaatataaatggacagcggacttccttgccacatattta
agtgaaaaacaaattccatcaacaagtattcatggtgatcgtttacaagatcagagagaa
atagcattaaatgattttcgcatcaataagatgaatgtacttgtagcaacaactgtagct
tcaagaggtttagatattaaatgtgtaaaccatgttattaattatgatatgcctcaagaa
attgaagagtatgtgcaaagaattggacgtacgggtaggttgggaaatcgaggaattgct
acttctttctttgatcctgatgaagattatcttttggtagacccattaataaaaactcta
gtgtcggcaaatcaagaaatacctcattggttagttaagttaagacgagagtctctgtgt
aatgatgataatgatgatttaaataaatttggaggctcagatataagaatgataacagat
tcagttgatgagtgtgaagactggtaa
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