Aphis gossypii (cotton aphid): 114124256
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Entry
114124256 CDS
T05869
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114124256
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
114124256
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
114124256
NCBI-ProteinID:
XP_027843245
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All DBs
Position
2:46676672..46696540
Genome browser
AA seq
2185 aa
AA seq
DB search
MTHSSHQTNGASLEDCHTNFFALTDLCGIKWRKFVHCSAGPEGPPDWGGGPGGGTNACGS
VLEDPVLSSYTRCLTHDMLAVWRRVSLPPANSQQTSLDPLVPAPPTPIPALPPALSLKAS
KELWIFWYGEEPDLTGLVSPQLLLNEGDNGSWESGLSYECRSLLFKALHNLIERCLMSRE
FIRLGKWFVQPYSSSEKLDNSSASHLSFSFAFFVHGESTVCASIDVRQHSVVRTLSKEHL
AQASSQPQSGTNIQVMLAPFGLAGTLTGHVYKNMDTETSRMMDEWSHFYPVVNNNGSNEL
TPAVEVLVGGVKMRYPSCYVLVTDLDDSTAELHKNQNTHQTTPQPQQQQQQQQQQPQPQP
QPQQPPPQLHQQQQQQIVPKQQLFASKHQHHPDTIIYALDNAVSAIPERAWQDCVLGPLH
TEQNPPSRPESPTLGQWHLSDPLQKLTCSCTRCRKTSSKHQTQPIGTPFHRRTPLPDIFI
TQQPPPDANNATLRSTRLCPTDSPCGLDSVPPLPSVPTPPSAGQPAPLSIPPPMLSPHDE
KIPITPLSVDFQPKSVSSVSNQVFSPYPSSAPASQEPVKSGQESNSGTPAPPSNTVSIPA
TTPTATTPVPMQTQSSSAYITLKRPQLSSKDYETNLVEEEIMPSKLLYDYSCIDAWLYHP
VKKFKPIVPKQEPITRINNVMDNPASPPQVYIRRDTCVPILPVEPSEVSINNFSSFEELR
NNALRFKGGRSDPYEFDEESGACSSNNIMISNDYKLNTSMAVMKNEDIKKEYDPGLMNGN
RCTNDNIRDIDHMFDNSDDLSSDEAVAALQMQTPPGSNKPDDCLGGGLTTLLVRPPRGSG
GGSGGGVLRPEELVKMFPTPPSLEHNPIASPCPDIDLLPPRTYQTSSYMGSPQHDHIDDW
SYVYKPPAIAKMVGSSKYAPLTNLPSQNLPPLIVPSNCVYKPSSFVYHASSQPQQIQHHP
PQPEKSNQIVPPPASSANNNLLPNVNRNNHYHHPIMMSPSPHNSTPWPGGGNQYHRPPQQ
QIQQHQQVPPPPYSPALSQHHNMNVVPTNMSPPVPEANSIVVNVLLTDSLLNVFRDHNFD
SCTLCVCNAGPKVVGNIKGTDAAVYLTHTLTPNGYSSQYQQHHMSVGIPGDEDGIRCSCG
FSAVVNRRLSHKSGLFPEDEAEITGLTEDSPVRVDDNSMNPDVLELVREQCAAVIYSSCS
SLVRAAAKFPINHPPQTSTVNMLEFTDTNQVALLALEQGRLAKLEGGINSHWQVEHHRWP
GHHQQSMPPLNNNSPPVHRWAYSQAPGPRSSRQLIRVMRTLQPLLQEAIQRRSVTTRLWE
PYTVTGPLTWRQFHRLAGRGTDDRCEPQPIPPILVGHDKDWVAVAPLALHYWDKLLLEPF
SYSRDVAYIVVSPDNEFILQRTRAFFKELSAAYEINRLGRHCPITKVLRDGILRVGKSAA
AKLAKEPVDEWFSMLGENHQSSMLKLYAQVCRHYLAPQLSQFSMDKTLLDPPEGSIPRPP
PSPMPPPASSMTPNSVESPVSSNERAPTPKNDGLDDSSSSSQADKSFNSNGDNSHCEEDD
GEVPAIVIYLVEPFSIGKDSSNLARIACHGLLRCYNTVLATLPEAIRSNISVQLISLESV
LELGRSSDHLKMSDNMRTLALSVFSQCRRYLTHTANIKALTGFGTAAMTELFLKNKDEKS
RTAYKAYTPPFILAGYRNNKTGRPDSGIAGDSSSAGDSLSNIGGLNGTGSPSGTDQQCSV
LYASYCISEDQRWILATATDEQGILLETATINIYVPNNRRRKSPARRIGLQKLMDFILGV
MSQSVTPWRLVVGRVGRIGHGELKGWSWLLSRKALMKASRHLKESCGQCSLLYQKSDVPS
VVSACLVSLEPDSSLRLMTDQFTPDERFSQASVACQLSTPRDVSSTHILVFPTSATTQSS
QTAFQEQQINGPELGDDELFSAFNEEDMQSMEGMGDFNDIFSTWNDSDPVGNTSLGLPSG
GVSGVLGGPSNNVIGGVMGSGSLGGSIGMGRGSMGPRGDCSSQPGSPPSSQPCSPYNCGS
SSYRNGGSCIDGHEEVGALLQQPLALGYLVSTAPTGRMPTWFWASCAPDIEKCSPAFLKS
ALHMHTVQLPNNADPAAADLLHPTSAVSAHPLDSQYTTDVLRYVLEGYNALSWLSLDSNT
HDRMSCLPIHMQVLMQLYHTMNALI
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgactcactccagccatcagaccaacggcgccagcttggaggattgccacacaaacttc
ttcgccctgactgacttatgcggcataaaatggcgtaagtttgtacactgttctgctggt
ccagaaggacctcctgattggggaggtggtcctggtggtggaaccaatgcctgtggctcg
gtgcttgaggatcctgtgttatccagttatacaagatgtttaacacatgatatgttagct
gtatggcgacgtgtttcattaccgcctgccaactctcaacagacatcacttgatccctta
gttcctgcaccaccaacacccataccagctcttccacctgcactttctttgaaagcatcg
aaagagctatggatattttggtatggtgaagaaccagatctgactggacttgtttctcct
caacttttacttaatgaaggtgataatggttcatgggaaagtggtctatcttatgaatgt
cgttcacttttatttaaggcacttcataacttaatagaaagatgtttaatgtctagagaa
tttattcgattaggaaaatggtttgtacaaccttattcatcttcagagaagttagataat
tcaagtgcgagtcatttgtcattttcttttgcgttttttgtccacggagaaagcactgtt
tgtgctagcattgatgtacggcaacattctgttgtacgaactttatcaaaagaacaccta
gcacaagcgtcctctcaacctcaaagtggaacaaatattcaagtaatgcttgcaccattt
ggcctcgctggtacattaactggccatgtatataaaaatatggatactgaaactagccgt
atgatggatgaatggagtcatttttatccagttgttaataataatggatctaatgaatta
actcctgcagtagaagttttagttggtggtgtaaaaatgagatatccatcatgttatgtt
ttggtaactgatttagatgacagtactgctgagttgcataaaaatcagaacactcatcaa
actactcctcaaccacaacaacaacaacaacaacaacaacaacaaccacaaccacaacca
caaccacaacaaccaccgccacagctgcatcaacaacaacagcaacaaatagtgcctaaa
caacaattatttgcgtctaagcatcaacatcatccagatacaataatatatgctttggat
aatgcagtatcagccatacccgaacgagcatggcaagattgtgtgttaggaccactacac
acagaacagaaccctccatctagacctgaatcaccaactttaggtcaatggcatttatcc
gatccattacaaaaattaacatgttcctgtacaaggtgtagaaaaacgagttccaagcac
cagacacagccaatcggcacaccattccatagacgcactcccctccctgatattttcatc
actcagcagccgccacccgatgcaaacaatgccaccctcaggtctacacgtctttgtcct
acagatagtccttgtgggctagattctgtgccacctttgccttcagtaccaacccctcca
tcagctggacaaccagctccactttcaattcctcctccaatgcttagtccacatgatgaa
aaaattcctattacacctctttcagttgacttccagcctaagtcagtatcatctgtctcc
aaccaagtattttcaccttatccttcatctgctcctgctagtcaggaacctgtaaaatct
ggacaagaaagtaattctggcacacctgcaccacctagtaatactgtaagcatcccagca
actacgccaactgcaacgactccggttccaatgcaaacgcaaagttcaagtgcttatatc
acattgaaacgaccacaactatcatctaaagattatgaaacaaatttggtcgaagaagaa
ataatgccgtctaaacttttatatgattattcttgtattgatgcgtggttatatcatccg
gtaaaaaaatttaagccaatcgtacctaaacaagaaccaattacaagaataaataatgtt
atggataatccagcatctcctccacaagtatatattagaagagatacttgtgtacctatt
cttccagttgaaccatctgaagtttcaataaataattttagcagctttgaagaattaaga
aataatgctctcagatttaaaggtggtcgttcagatccgtatgaatttgatgaggaaagt
ggggcttgttctagcaataatattatgatttctaatgattataaacttaacacttctatg
gctgtgatgaagaatgaagatatcaaaaaagaatatgatcctgggttaatgaatggaaat
aggtgtacgaatgataatattcgggacattgatcacatgtttgacaattctgatgatttg
tctagtgatgaggctgtggcagctttacaaatgcaaacacctcctggctcaaataaacca
gatgattgtcttggaggagggttgacaacacttttagtgcgacccccaagaggtagtggt
ggtggcagtggcggtggtgtattaaggcctgaagaattagtaaaaatgtttccaactcct
ccatcgttagaacataatcctatagcatctccatgtcctgacatagatttacttccacct
cgtacttaccaaacaagttcttatatgggaagtcctcaacatgatcacatagatgattgg
tcgtatgtgtacaaacctccagctatagcaaaaatggttggttcttcaaaatatgcgcct
ctcacaaatcttccgagccaaaatttacccccgttaatagtaccttccaattgtgtttat
aagccttcctcttttgtttatcatgcctcgtcacaacctcagcaaattcaacaccatcca
ccccagcctgaaaaatcaaatcagattgtacctccgccggcatcttcagctaataacaat
ttattaccaaacgtaaatagaaataatcattatcatcatccaataatgatgagtccatca
cctcataatagtactccatggcctggaggaggaaatcaatatcatcgacctccacaacaa
caaatacaacaacatcaacaagtgcctcctcctccatatagtcctgcactttcacagcat
cacaatatgaatgttgtaccaacaaatatgtctccacctgtacctgaagctaactcaata
gttgtgaatgttttgttaactgactcactattaaatgtcttccgagatcataattttgac
agttgcacattatgtgtttgtaatgctggtccaaaagttgtgggtaatatcaaaggtacg
gatgcagctgtttatctcactcatactttaactcctaacggatactcatctcagtatcaa
caacatcatatgtcagttgggattcctggtgacgaggatggaatccgatgtagttgtggt
ttcagtgctgttgtgaaccgcagattatctcataaatcgggattatttcctgaagatgag
gctgaaataactggacttactgaagatagtcctgtgcgtgttgatgataattctatgaac
ccagatgtattagaactagttagggaacaatgtgctgctgtaatttatagttcttgtagt
tctctagtacgggcagctgcaaagtttcccataaatcatccaccacagacttcaactgtt
aatatgttagaatttactgatactaatcaagtagctctattggctcttgaacaaggaaga
ttagctaagctggaaggtggaataaatagtcattggcaagttgaacatcaccgctggcct
ggtcatcaccaacaatcaatgccaccattgaataataattctccccctgtgcatagatgg
gcttatagtcaagcaccaggaccacgtagtagtaggcaacttataagagttatgaggaca
ttgcaaccacttttacaagaagctattcaaagaagaagtgttactactaggttatgggaa
ccttatactgtcactggaccattaacttggagacaatttcatcgattggctggtcggggt
actgatgatagatgtgagccccaaccaattcctccaattcttgtgggacatgacaaagat
tgggtagctgttgctccattagcacttcattattgggataaattattattagaaccattt
tcatattcacgcgatgtcgcatacatagttgttagtccagataatgaatttattttacaa
agaacaagagcatttttcaaagaattaagtgcagcttatgaaatcaatagattaggtcgt
cattgtcctattacaaaagtgttacgagatggtattctcagagtcggcaaatcagctgct
gcaaaattagccaaagaacctgtagacgaatggttctcaatgttgggtgaaaatcatcag
tcatccatgttaaaattatacgcccaagtttgtcgtcattatttagctccacaactctct
caattttctatggataagactttattagaccctccagaaggtagtattccaagacctcca
ccttcgccaatgccaccaccggcatcgtcaatgacacctaactctgtggaatcgcctgtt
tcatctaatgaacgtgcacctactcctaagaatgatggattggatgattcttctagtagt
tcacaggctgataaaagttttaatagtaatggagataatagtcactgtgaagaagatgat
ggagaagtgccagccattgttatttatcttgttgagcctttttcaattggcaaagatagt
agtaatcttgccaggattgcttgccatggtcttttacggtgttataatactgttttggct
acacttccagaagctatacgatcaaatatttcggtccagttaatatctttagaaagtgtt
ttggaacttggccgatcctcagatcatcttaaaatgagtgataatatgagaactttagcc
ttgtcagtgtttagtcaatgcaggcggtacttaactcacactgctaacatcaaagcctta
actggatttggcacagcagccatgactgaattgttcttaaaaaataaagatgaaaaaagt
cgaacagcatataaagcatatactcctccttttattttagctggttatagaaataataaa
actggtcgaccagatagtggaatagctggcgatagtagcagtgctggtgattcattatca
aacattggtggacttaatggaactggttctccttcaggtactgatcaacaatgttcagta
ctttacgccagttattgtatatcagaagatcaaagatggatattagctacagcaactgat
gaacagggcattctattagaaacagctacaattaatatatatgtaccaaacaataggcga
agaaaatctccagctcgtagaattggtctacaaaagttaatggatttcatcttaggtgta
atgagtcaaagtgtaacaccttggcggttagttgtaggtcgagtgggaagaattggacat
ggagaacttaaaggttggtcatggctattgagtcgtaaagcattgatgaaagcatcgcgc
cacttaaaagaatcttgtggtcaatgcagtctgttgtaccaaaaatctgatgtaccttct
gtagtcagtgcttgcttagtttccttagaaccagattcttcattaagactgatgacagat
caattcacacctgatgaacggtttagccaagcatctgttgcttgtcaactctctacaccc
cgtgatgtatcatcaactcatatactagtttttccaacatcagctacaacacaatcctca
caaactgcgttccaagaacaacaaattaatggtcctgaacttggtgatgatgaattattt
agtgcatttaatgaagaagatatgcaaagtatggaaggcatgggtgacttcaatgacata
tttagtacatggaatgattcagatcctgtgggaaatacgagtttgggacttcctagtggt
ggtgtttctggggttttaggtggtccaagcaataatgttataggaggtgttatgggttct
ggatcattgggtggttccataggaatgggtcgaggatcaatgggacctagaggagactgt
tcttctcagcctggtagtccaccatcttcacaaccatgtagtccttataattgtggatca
tcttcatatagaaatggtggtagttgtattgatggtcatgaagaagtgggagcattactt
caacagccattggctttaggctatctagtatctactgcaccaacaggacgtatgcctaca
tggttttgggcttcatgtgcacctgacatagagaaatgcagtcctgcattccttaaaagt
gcattgcatatgcatactgtgcaattacctaacaatgctgatcctgcagctgcagatctt
cttcatcctacatctgcggtttcagcacatccactagattcacaatatactacagacgtc
ctaaggtatgttttggagggttacaatgcattatcatggttatcattggactcgaacact
catgaccgaatgtcttgcttgcctatacacatgcaagtactaatgcagctttaccatact
atgaatgctcttatatga
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