Aphis gossypii (cotton aphid): 114124267
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Entry
114124267 CDS
T05869
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114124267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ags03041
]
114124267
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114124267
Spliceosome [BR:
ags03041
]
Complex A
U2 snRNP components
U2 related factors
114124267
Complex B
114124267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
114124267
NCBI-ProteinID:
XP_027843260
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All DBs
Position
2:complement(46598926..46607735)
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AA seq
984 aa
AA seq
DB search
MVRSGSDRIHRKRSSRSRSPRRHRRSSRSRSRSPRHKIHKSIRDRKKSRSPRRSRSPRNK
RKSPERKPEEVPFDPTNPDKETEQKKLELEMQKRRERIERWRAERKKKELDNVKKDVRTT
IMSNLQIPSKKWNLEDDSDEEEEAKNNAEKIIEEEEIDPLDAFMQGVQEEVRKVNKVDGH
RSNLSEKTSLNDLKQNLGVDTTSSGVVIVSGVAKKKDNNTRGELIEQNQDALEYSSEEEQ
EDLNIAAASLANKQKKELPKIDHAEMSYLPFRKNFYVEVPEIARMTTEEIEKYKEELEGV
RVKGKGCPRPIKVWAHCGVSKKIMDNLKKHNYEKPTPIQTQAIPAIMAGRDLIGIAKTGS
GKTLAFLLPMFRHIMDQPPLEDTDGPIAIVMAPTRELCMQTGREARKFTKSLGLRVVSVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRVIDNIRPDRQTVMFSATFPRQMEALARRILQKPIEVQIGGRSVVAKEVEQHVVIV
EEEQKFMKLLEVLGVYYEKGSCIVFVDTHENADTLLQKLLKASYPCMSLHGAIDQYDRDS
TIVDFKSGQIKLLVATSVAARGLDVKDLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAY
TLVSPDQERFAGDLIRALETSNVSVPESLRTMWLRYQAKQAAEGKQVHTGGGFSGKGFKF
DETEAVMANEKKKLQKAALGLQDSDDEDIEGDIDQQIETMLAPKRIVKEVKASAIGLPNL
TGLMEVNGTPQASERLELAKRLASRIHIAKNLGPDAKGASQQTAEAILKGGLASSQPVIT
AKTVAEQLAAKLNTRLNYQPKDDDGENECGDSPEAGAEEIFRKYEEELEINDFPQQARWR
VTSKEALAQISEYSEAGITVRGTYYPPPKNPPEGERKLFLAIESTDELAVSKAKIEITRL
IKEELLKMQTSAHHMVNKARYKVL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtagcgggagcgatagaatccaccgtaaacgttcaagtcgatcacgaagtcct
cgtcgtcatcgtcgtagtagtagatctcggtctcgatcacctcgtcataaaatacataaa
tcaataagagacagaaaaaagtcaagatctcctcgtcgttctcggtcaccacgtaacaaa
agaaaatcaccagagcgtaaacctgaagaagtaccttttgatccaaccaatccagataag
gaaactgaacaaaaaaaacttgaattagaaatgcaaaagcgtcgagaacgtattgaacgc
tggagagcagagcgcaaaaaaaaagaattagataatgtaaaaaaagatgtccgaactaca
attatgtccaacttacaaataccttcaaaaaaatggaatttagaagatgatagtgacgag
gaagaggaagcaaaaaataatgcagaaaaaataattgaagaagaagaaattgatccttta
gatgcatttatgcagggtgttcaagaagaagtacgtaaagttaataaagtagatggacat
cgtagtaatttatcagaaaaaacttcattgaatgaccttaaacaaaatctaggagttgac
actaccagttcaggtgttgtaattgtatctggagtagcaaagaaaaaagataataatacc
agaggtgaactcattgagcaaaatcaagatgccttagagtattcgtctgaagaagaacaa
gaagatttgaatatagctgcagctagtttagccaataaacaaaaaaaagaattaccaaaa
attgatcatgctgaaatgagttatttaccatttagaaaaaatttttatgttgaagtacca
gaaatagctcgcatgactactgaagaaattgaaaaatacaaagaggaattagaaggtgtt
cgagtaaaaggaaaaggatgccctcgaccaatcaaagtatgggctcactgtggtgtgagc
aaaaagattatggataatttaaaaaaacataattatgaaaaacctactccaatacaaaca
caagctattcctgctataatggctgggcgtgatcttatcggcattgcaaaaactggtagt
ggcaagactctggcgtttttattgccaatgtttaggcacattatggatcaacctccttta
gaagatactgatggaccaatagctattgttatggcgcctacaagagaactttgcatgcag
actggaagagaagctcgcaagtttacaaagagcttaggattaagagttgtatcagtttat
ggtggtactggaatatcagaacagatagcagaattaaaacgtggtgcagaaattattgtg
tgtactcctggccgaatgattgatatgttagctgcaaataatggtagagttaccaactta
agacgagtaacatatgttgtattagatgaggctgatcgtatgtttgacatgggatttgag
cctcaagtaatgcgagtaatcgataatatacgtccagatcgtcaaactgtaatgtttagt
gctacattccctcgtcagatggaagctttagctagaaggatattacaaaaacctattgaa
gtccaaattggaggcagaagtgttgttgccaaagaagttgaacagcatgtagtaattgtt
gaagaagaacagaaattcatgaagttgcttgaagttttaggagtctattatgaaaaagga
agttgtattgtgtttgtagatactcatgagaatgcagatacacttctacaaaaattgtta
aaagcttcctacccatgtatgtcattacatggtgctatagatcaatatgaccgagatagt
actatagtagactttaaaagtggacaaatcaaattgttagtggctacttctgttgctgcc
agaggattagatgttaaagacttgatattagtagttaattatgattgtcctaatcattat
gaagattatgttcatagatgtgggagaactggaagggcaggtaataaaggatatgcatac
acattagtttcaccagatcaagaaagatttgctggtgatttaataagagccttggaaaca
tccaatgtatctgtaccagaatcattacgtactatgtggctacgttaccaagcaaaacaa
gctgcagaagggaaacaagttcatacgggtggtggttttagtggaaaaggatttaaattt
gatgaaacagaagctgttatggctaatgaaaagaaaaaattacaaaaggctgctcttggt
cttcaagattctgatgatgaagacatagaaggagatattgaccaacaaattgaaacaatg
cttgcacctaaacgaattgtaaaagaagttaaagctagtgctattgggcttccaaatcta
actggcttaatggaagtaaatggaactcctcaagcatcagaacgacttgaattagccaaa
cgtttagcttcacgtatccatattgctaaaaaccttggtcctgatgccaaaggtgcgtca
caacaaactgcagaagctatattaaaaggaggtcttgctagttctcaacctgttatcact
gctaagactgttgctgaacaattagctgctaaattaaatacacgactgaattatcaacca
aaagatgacgatggtgaaaacgaatgtggagatagtcctgaagcaggagcagaagaaata
tttagaaagtatgaagaggaattagaaataaatgatttcccccagcaagctaggtggaga
gttacttctaaggaggctttagcacaaatatcggaatattcagaagcaggaattacagtc
agaggtacttattatccaccacctaaaaatcctcccgaaggagaacgtaaactattttta
gctattgaaagtactgatgaattagcagtctcaaaagcaaaaatagaaatcactcgtctt
atcaaggaagaattattaaaaatgcaaacttctgcacaccacatggtcaataaagctcga
tataaagtcttgtaa
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