Aphis gossypii (cotton aphid): 114124335
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Entry
114124335 CDS
T05869
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114124335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114124335
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114124335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114124335
NCBI-ProteinID:
XP_027843361
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All DBs
Position
2:complement(22326469..22327634)
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AA seq
211 aa
AA seq
DB search
MSEDFLKCQLGFLGNTEGSAYLSQGKSTVSVSVVGPFEPKASKCMYDRATVDVTFRRKTG
SITVHDKMLEGIMQSTCEKSLVVEQYPRTAIVVTVQEMQDRGNLLSTCLNASCMALMNSG
IAMHHLYAAVSCAVTENEEIILNPDESQINSSVAYFTLVFANSETRFLLTSHTTGEFSQT
TYMECMNKCYAASKEVFKFYENVIKKSYIFN
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagattttctaaaatgtcaactaggctttttaggtaacaccgaaggctcagca
tatttatctcaaggtaaaagtactgtttctgtgtcggttgttggaccatttgaacccaag
gctagcaaatgcatgtatgaccgtgctactgtggatgtgacttttagacgaaaaactgga
agcataactgttcatgacaaaatgttagaaggtataatgcaatcaacatgtgaaaagtcc
ctagttgttgaacaatatcccaggacagcaattgttgtaacagttcaagagatgcaggac
agaggaaatttattgtccacttgcttgaatgcttcttgtatggcactgatgaattctggt
attgctatgcatcatttgtatgcagcggtgagttgtgctgtcaccgagaacgaagaaatc
attctcaatccagatgaatcacaaataaattcttctgttgcatattttacactagtgttt
gcgaactctgaaaccaggtttctgttaacttcgcataccaccggagaattttcacagaca
acatatatggaatgtatgaacaaatgttatgcagctagtaaagaagtttttaaattttat
gaaaatgtcataaaaaaaagttatattttcaattaa
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