Aphis gossypii (cotton aphid): 114124344
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Entry
114124344 CDS
T05869
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ags03400
]
114124344
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114124344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
SAP_new25
Motif
Other DBs
NCBI-GeneID:
114124344
NCBI-ProteinID:
XP_027843374
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Position
2:22792341..22798665
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AA seq
956 aa
AA seq
DB search
MSMKQLSSDTIKLISSTQVITSASSVVKELMENSIDANATIIDIRLDNYGLDKIEIRDNG
VGISHSDVYVMCLRNYTSKIFDISDLNKLTFYGFRGEALSSICAVADVTVITKSDFDEYA
KSFTMDSNGRVKNSSICHHQKGTVIKIENLFKKLPVRKQIYSSKKHCVNDLRRVENIVKS
LAAIQQNIRVSLVHNKSVLWQMTSATDLVVTFGQIWSSSMTKCVKHLTFKSEEVNIDIVL
PIQNINVQNCFFTTNVADAIYLYVNKRPVRDNKIEKLIVGEFNNYFGHYLPPGKYLPCLI
SITIPPETIDINLEPDKSRILFHNQDMILLNLKNCIAKYYYDDKVENDQSNINKVPEQVN
NKRKIPYDSEEVQVKKSPILISQVNDSFVPNAESTKIINNNSFNSVSNNDEHTQIVKDLS
LEEIDFEEPFILKDDKNDETSCLKNHKVESTDDISEYRKKLLNIGNTSPLQTIQSDSANV
RNFVAEDISISQWSKGDVVLNGKPLESGVVLKSDILIEILEKNSEPKMNKETEILHSPTV
PQKDENIVEKNDNSVNINDETSENISITSSNSSTKQLKIENLFRTVSIPDEQVPGLNHLV
NRPQSWVPQPRSKRPIKAIPEEELSDTIRSVSSQMGNKEMSGFTLFAREMRIKIIQENPG
IEFTKVSKELARLWGSLSEDEKLRYKKLSNEQKKGITNKTNDVQLPKKSFQAIAMNLERH
STQINVELSEIKRNIFKNQKMMSFEFMLIGQIEDNNWFCCVRNEIQALNICRLQEAVIFF
QKLANDEIPLKMLDQSIITSKKYLGEKNYRFLMDLDNSYEPSADKYTITDKRIVKNGFNI
VIVFNEDSDNPDINITDVALHISTYGAEELKQLLELMQLEKENNNLHCCRPLKVVNYLRS
ETVRYCKMTGLPKTKEEINSLLEYWFKNEKFFSQNTCIHYKKVFTSIHCIDEKSIT
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgaaacaattatcgtcggatacaattaaactaataagtagtactcaagtcatt
acttcggcatcgtctgtggtgaaggaattaatggaaaactctattgacgccaatgctaca
atcatcgatatacgtttggataactatggactagacaagattgaaatacgcgacaatggg
gttggcatttcacacagtgacgtctatgttatgtgtttgcgtaattacacttccaaaata
tttgatatatctgatttgaataaattgactttttacggatttcgaggtgaagctcttagt
tccatttgtgctgtagctgatgtgactgtcattacaaaatcagattttgatgaatatgcc
aagtcgtttaccatggacagtaatggtcgtgtgaagaatagttcaatttgtcatcaccaa
aaaggtactgttatcaaaatagaaaaccttttcaaaaagttgccagttcgaaaacagatt
tatagttcgaaaaaacactgtgttaatgatttacgtagagtagaaaatattgttaaatca
ttagcagctattcaacaaaatattcgtgtttctctggttcataataaatctgtgttatgg
caaatgacttcagctaccgatttggttgtgacatttggtcaaatttggtcatcttcaatg
actaaatgtgtaaaacacttaacatttaaaagtgaagaggttaatattgatatagtttta
cctatacaaaatataaatgtgcaaaattgtttttttaccacaaatgttgctgatgcaatt
tatttgtatgtaaataaaagaccagttagggacaacaaaattgaaaaacttattgttgga
gaattcaataattattttggacattatttacctccaggcaagtacttgccatgtcttata
tctataaccatcccacctgaaactattgatataaatttggaaccagataaatctcgaata
ttatttcataatcaggatatgatattactcaatcttaagaactgtatagctaaatattat
tatgatgataaagtagaaaatgatcagtctaatattaataaagtcccagaacaagtgaat
aataaaagaaaaataccttatgattcagaagaagtccaagtaaaaaaatctccaatatta
atttcacaagttaatgattcttttgtcccaaatgcagagtcaactaaaattattaataat
aattcatttaactctgtatcaaataatgacgagcatacacaaattgttaaagatttaagc
ttagaagaaattgattttgaagagccatttatattaaaagacgataaaaatgatgaaaca
tcatgtttgaaaaatcacaaagtggaaagtaccgatgatatttcagagtaccgtaaaaag
cttttgaatattggaaatacttctcctcttcaaactattcaatctgatagcgcaaatgtt
agaaattttgtcgctgaagatatatcaatttctcagtggagtaagggtgatgtagttctg
aatggaaaaccattagagagtggagttgtattaaaatctgatattttaattgaaatctta
gaaaaaaacagtgaaccaaaaatgaataaagaaactgaaattcttcattctccaactgta
cctcaaaaggatgaaaatattgtagaaaaaaatgacaattcagtaaatataaatgatgaa
acttcagaaaatatttccataacttcatctaatagtagtacaaaacagttaaaaattgaa
aatctttttcgtacagtttctattcctgatgagcaagttcctggtcttaatcatttagta
aatcgtccacagtcttgggttcctcaacctagatcaaaaagaccaataaaagctattcca
gaagaagaacttagtgataccattcgaagtgttagcagtcaaatgggaaataaagaaatg
tcaggatttacactgtttgccagggaaatgagaattaaaattattcaagaaaatccagga
atagaatttacaaaagtaagcaaagaactcgcaagattatggggaagtttaagtgaagat
gaaaaattaagatataaaaaattatcaaatgaacagaaaaaagggataaccaataaaaca
aatgatgtacaattaccaaaaaaatcatttcaagctattgctatgaatcttgaaaggcat
tccactcaaattaatgtagagttatctgagatcaaaagaaatatttttaagaatcaaaaa
atgatgtcattcgaatttatgctcattggtcaaatagaggacaacaattggttttgttgt
gtgcgtaatgaaatacaagctctaaatatttgccgtcttcaagaagctgtaatttttttc
cagaaattggctaatgatgagataccacttaaaatgttggaccaatcaattataacaagt
aaaaaatatttgggcgaaaaaaactatcgctttctaatggatctggataattcgtatgaa
ccatcggctgataaatatactattacagataaaagaatagttaagaatggttttaatatt
gttattgtatttaatgaggattctgataatcctgatataaatatcacagatgtagcttta
catatatcgacatatggtgccgaggaactcaaacaactattagaattgatgcaattggaa
aaagaaaataataacctacattgttgtcgtccgttgaaagtagtcaactatctgcggagt
gaaactgtaagatactgcaaaatgactggactccctaaaacgaaagaagaaattaatagc
ctattggagtattggtttaaaaatgaaaagtttttttcccaaaatacttgcattcattat
aaaaaagtttttacatcgatacactgtattgatgagaaatcaataacataa
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