Aphis gossypii (cotton aphid): 114124406
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Entry
114124406 CDS
T05869
Name
(RefSeq) probable oligoribonuclease isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114124406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114124406
03009 Ribosome biogenesis [BR:
ags03009
]
114124406
Messenger RNA biogenesis [BR:
ags03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
114124406
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
Pre-60S particles
RNases
114124406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
114124406
NCBI-ProteinID:
XP_027843451
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Position
2:complement(83446401..83451144)
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AA seq
209 aa
AA seq
DB search
MLKFKNVINQLKTISNINLRRKMTTINPKLYHEHNIVWFDGEMTGLDYNHHTFIEAAIII
TDKHLNVLAESPNIIIHQSDEVLENMEDWSKKQHALSGLTENVRKSNISIEQADQMLYEF
IKPFTPKGVCPLAGNSIYMDRAFIRKYMPKLENHLSYRLIDVSSLKELFKRWKPELANEA
PKKSLQHRALNDIKDSVQELKFYKSCLQL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattcaaaaatgtaattaaccaattgaaaacaataagtaatataaatttaaga
agaaaaatgaccaccataaatcctaaattatatcatgaacacaacattgtatggtttgat
ggtgagatgactggattagactataatcatcataccttcatcgaagcagctataattata
actgataaacatttaaacgttttagctgagagtccaaatattattatacatcaatcagac
gaagtgttagagaacatggaagattggtccaaaaagcaacatgcattgagtggcttaact
gaaaatgttagaaagagtaatatatcaattgaacaagctgatcaaatgttatacgagttt
atcaaaccatttactcctaaaggtgtttgtccattagctggtaattcaatttatatggat
agagcttttattagaaaatatatgccaaaacttgaaaatcatttaagttatagattaata
gatgtgtcttctctaaaagagttgtttaaacgctggaaacccgaattagcaaatgaagct
ccaaaaaaatcacttcagcatagagctcttaatgacattaaagatagtgttcaagaactc
aaattttacaaaagctgcttacagttataa
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