Aphis gossypii (cotton aphid): 114124866
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Entry
114124866 CDS
T05869
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114124866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114124866
03009 Ribosome biogenesis [BR:
ags03009
]
114124866
03036 Chromosome and associated proteins [BR:
ags03036
]
114124866
Enzymes [BR:
ags01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
114124866
Messenger RNA biogenesis [BR:
ags03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
114124866
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
90S particles
RNase
114124866
Prokaryotic type
rRNA processing factors
114124866
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
114124866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
114124866
NCBI-ProteinID:
XP_027844109
LinkDB
All DBs
Position
X:complement(52544624..52553294)
Genome browser
AA seq
1271 aa
AA seq
DB search
MEGSYQPSFNYQQNQSMTYSQNSYNNGYNIQQVKDVGTNNYYNSTPITASFAYNNVNNPF
NVGYNMIPTNMPYASSTSSSNTNYTNGSYVPPTLYSYSNIPPPQHPQMTGYFNNESLPGV
TKKTFPNEYIQSSSNNISYTPNMPLPVNQTDTYKPPVNNKQYSYNQACNDAKESNKKDEW
FDLTSKFLNNGKKSSSRKHSSTSSHAPSGSKRSHRSSSPKPRNISKERNVKSTKINEEMS
SEMSEMKKLSNMSIQQIIDYEKKKSSKSAPTDVYYKKQEDNSKVIFGNKTALKICDEFEN
TLGKRVSNINDKKPVICKPRKVNVNVHKHVCSGNNGSSTSDDDDDEDEYYEKENSTLKEL
DRKCSHPDRLHSELWYNEVGEMNDGPMCKCSVKSQRSGIRHNIYVGEGPFEPCLPNSNNG
DKLFHYRITITPPTNFLLKSPTVIEYKGNKYIFEGFSLLSHYPIPILPTCKVIRFNTNYA
ILYIEDKIPDNFIVKELQLFYDYLFKDILELVDLDLHGIGNKDGCPQFHFMPRFVRDLPN
NGKEVLSMNEVLKYLLKSNKLLFEENSLPALKNMPMNEWQNIVDEYKGMIVTNPSTKPYS
IRVDQLDRDTVNEASEKNVNNGYPVLVHFGIRPPQLSYAGNPDYQKGWRDYVKFRHLLAN
MPKPSFEDKRKLEIKERALQEMRSHNKMKRGVTAAVSSKGFFKTGLMCDIVQHAMLLPVL
VCHFRFHKSLEYLEDTIEYKFKNKYLLQLALTHPSYRENFGTNPDHARNTLTNCGIRQPE
YGDRRIHYMNTRKRGINTLINIMSRFGKKSEMESNIMHNERLEFLGDAVVEFVSSIHLFN
MFPDIEEGGLATFRAAIVQNQHLAVLAKTLKLDDYMLYAHGSDLCHDSELKHAMANCFEA
LMGALFLDGGIDVADRVFGKTFYRDSPEYLDIWVNYPKHPLQQQEPEGDRKWIKKLPLLQ
KLTNFENSIGIKFTHIRLLARAFTDRSVGFTNLTLGSNQRLEFLGDTVLQLIASDYLYKY
FPEHHEGHLSLLRSSLVNNRTQSVVCDDLGMVSYALYANPKAELKTKDRADLLEAFLGAL
YIDKGLKHCQAFCNVCFFPRLHDFILKQDWNDPKSKLQQCCLTLRSVDGGEPDIPVYKVI
ECMGPTNGRKYTVAVYFKSVRLSQATGHSIQRAEMNAANSALEVSKDLFPQLDHQRRAIS
RSLRHQCSDGQANIEDIIKLIESNSTKNESELSDLDLAKRKLHRKLLAVLCANKSTVIEN
YSEPEKKKRKK
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggagggttcatatcagccttcatttaattaccagcaaaaccaatcgatgacttatagt
caaaattcatataataatggatataatattcagcaagtaaaagacgttggtacaaacaat
tactataatagcacacctataactgcttcttttgcttataacaatgttaacaatcctttc
aatgtgggatacaatatgatacctacaaatatgccatatgcttcatcaacaagctcttca
aatacaaattataccaatggtagttatgtacctcctacattatattcatatagtaatata
cctccacctcaacatcctcaaatgactggatattttaataatgaatcattacctggtgta
acaaaaaaaacatttcccaatgaatacatacaatcttcatcaaataatataagctataca
cctaatatgcccttacctgtcaaccaaacagacacatataaaccaccagtaaataacaaa
caatattcatataatcaagcttgtaatgatgcaaaagaatcaaataaaaaagatgaatgg
tttgatttgacatctaaatttttaaataatggcaaaaaaagttctagtagaaaacattca
tcaacatcaagccatgctccaagtggttcaaaacgttctcatcgttcttcatctccaaaa
cctcgtaatattagtaaagaaagaaatgttaaaagtacaaaaataaatgaagaaatgtct
agcgaaatgtctgaaatgaaaaaattatctaatatgtctattcaacaaataattgattac
gaaaaaaaaaagtcgagtaaatcagccccaacagatgtatattataaaaaacaagaagac
aattcaaaagttatttttggaaataagaccgcactgaaaatatgtgatgaatttgaaaat
accttaggaaaacgtgtttctaatataaatgataaaaaaccagttatttgtaaacctcgt
aaagtcaatgttaatgttcataaacatgtatgttcaggtaataatggttctagtacatct
gatgatgatgatgatgaagatgaatattacgaaaaagaaaattctacacttaaagagcta
gatagaaaatgttcacatccagacagacttcactcagaattatggtataatgaagttgga
gaaatgaatgacggtccaatgtgtaaatgtagtgtaaaatcgcaaagatctggtatacgg
cataatatttatgttggagaaggtccctttgaaccttgtttaccaaattctaataatggt
gataaattatttcattatagaattactattactccaccaacaaattttttactaaagagt
cctacagttattgaatataaaggaaataagtatatttttgaaggtttttcattactatcg
cactatcctattccaatcttacctacatgtaaagttattcgtttcaacactaactatgca
atattatacatcgaagataagattccagataactttatagtgaaagagttgcaattattt
tatgattatttgtttaaagacattttagaattagttgatttagatttgcatggtatagga
aataaagacggatgtccacaatttcatttcatgcctcgctttgttagagatttgcctaat
aatggcaaagaagtactttccatgaatgaagtccttaagtatcttttaaagagcaacaaa
ttactttttgaagagaactctttacctgctttaaaaaatatgcctatgaatgaatggcaa
aatatagttgatgaatataaaggcatgatagttacaaaccctagtactaaaccatattcg
atacgtgttgatcagcttgatagagatactgtaaatgaagcttctgaaaaaaatgtaaat
aatggttatccagttttggtacattttggtattcgaccacctcaacttagttatgctggt
aatccagattatcaaaaaggctggcgtgattatgtgaaatttagacatctcctagcaaat
atgcctaaaccatcatttgaagataaaagaaaactggaaattaaagaaagagctttacaa
gaaatgagatcccacaataaaatgaagcgtggagtgactgctgcagtttctagtaaagga
ttttttaaaactggactcatgtgtgatattgttcaacatgcaatgcttttaccagtactt
gtgtgccattttagatttcataaatctttggaatacttggaagatactatagagtataaa
tttaagaacaaatatttacttcaacttgcattaactcatccttcatatagagagaatttt
ggtactaatcccgatcatgcaagaaacactcttaccaattgtggtataagacaacctgaa
tatggagataggcgtatacattatatgaacacaagaaaaagaggtataaatacattaatc
aatataatgtcacgatttggtaaaaaatcagaaatggaatcaaatataatgcacaatgag
cgtttagaatttttgggagatgctgtcgttgaatttgtgtcttctattcatttatttaat
atgtttccagacattgaggaaggaggattagccacattccgagcagctattgttcaaaat
caacatcttgctgttctagcaaagactttgaagcttgatgattatatgctatatgctcat
ggctctgatttatgtcatgattctgagcttaaacatgcaatggctaattgttttgaagct
ttgatgggtgctctgtttttagatggtggtattgatgtagctgatcgtgtgtttggaaaa
acattttatagggattcaccagagtatcttgatatttgggtaaactatcccaaacatccc
ttgcaacaacaggaacctgaaggcgatcgtaaatggattaaaaaactaccattactccaa
aaactaaccaactttgaaaactctataggtataaaatttacccatataagattattagcc
agagcgtttactgatagaagtgtgggtttcacaaatttaactcttggatcaaatcaacga
cttgagtttttgggggatactgttttgcaattaatagcttcagattatttgtataaatat
tttccagaacatcatgaaggtcatttatctctacttcgaagttctttggtaaacaatcga
actcaatctgtagtatgtgatgatttaggtatggtcagttatgcactatatgcaaatcca
aaagctgaattaaaaacaaaagatagagctgatttgttagaagcatttcttggagcttta
tatattgacaaaggacttaaacactgtcaagcattctgtaatgtatgtttcttccctcgt
ctacatgatttcattcttaaacaagattggaatgacccaaaatctaaactacagcaatgt
tgtctaacattacgatcagttgacggtggtgaaccagatataccggtatataaagtgata
gaatgtatgggaccaactaatggtcgaaaatatacagtagctgtttattttaaaagtgtg
aggttgtcacaggccactggccatagtatacaacgagctgaaatgaatgctgcaaatagt
gcattagaagtatctaaagatttattcccacagttggatcaccaaaggcgtgctatatca
agaagtttacgtcatcagtgttcagatggtcaagcaaatattgaagacataattaagttg
atagaatccaattcaaccaaaaatgaatcagaattgagtgatttagatttagctaaaaga
aaactccatagaaaactattagcggttttatgtgctaataaaagtactgttatagaaaat
tattcagaaccagaaaaaaaaaagagaaaaaaatga
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