Aphis gossypii (cotton aphid): 114125232
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Entry
114125232 CDS
T05869
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114125232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114125232
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114125232
mRNA degradation factors
5'-3' decay
Lsm complex
114125232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
PBP2
Motif
Other DBs
NCBI-GeneID:
114125232
NCBI-ProteinID:
XP_027844594
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All DBs
Position
3:complement(26683391..26684261)
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AA seq
135 aa
AA seq
DB search
MNSFPPRTATLLYELDKKLMVLLRDGRTLIGYLRSVDQYANLLLQQTVERIHVGKKFGDI
PRGVFLVRGENVVLLGEIDALKEADQMFERVSIGDILALQKQEQDAKIEKAKSIERSLKR
RGMRFPPDLVQDDFL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttttccgcctagaactgctacacttttgtacgaattggacaaaaagcttatg
gttcttctacgtgatggtagaacgcttattggatacttaaggagtgttgaccaatatgcc
aatttgttgcttcagcaaacagttgagcgcatacatgtgggcaaaaaatttggtgatata
cccagaggtgtatttttagtgagaggagaaaatgtcgtactactcggagaaatagacgcc
ttaaaagaagctgatcagatgtttgaaagagtatcaataggagacattctagctttacaa
aagcaagagcaagatgccaaaatagaaaaagctaaatctattgaacggtctttgaaaaga
agaggtatgcgatttcctcctgaccttgttcaagatgatttcctttga
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