Aphis gossypii (cotton aphid): 114125310
Help
Entry
114125310 CDS
T05869
Name
(RefSeq) transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ags03000
]
114125310
Transcription factors [BR:
ags03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114125310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DDHD
LIM_bind
Motif
Other DBs
NCBI-GeneID:
114125310
NCBI-ProteinID:
XP_050061191
LinkDB
All DBs
Position
X:40994482..40998797
Genome browser
AA seq
475 aa
AA seq
DB search
MEGAPHMGNFDFIMDHHHHHHHGRALESSVSPPTSVVMQQQQQSLQQQQQQQQQQQQQQQ
QQQQQLPGKADHIKRPMNAFMVWAKIQRRLIAHDNPKMHNSEISKRLGAEWKLLNETEKR
PYIDEAKRLRALHMKEHPDYKYRPRRKPKIQLHNNNNNNNNNISGAHNNNGGMLHGSAGN
NNLHHHHAAHHKQTNFHAFPVVTASGGPGGPANFNFPMPYFSASHHPALHSFDSYSSAGL
VSPYLSTAMPSFDPIHLSKLVAQQQAVVAQSGGGGNSPSPSSQMAGSPPPAVDINAAVNG
LQQPLQPHLHQQPQQQHHLQPPHAKNGGAAVVSSFYNQFYPPAAGSGKAGPYPHHPMSIF
PSPFSFYNNGGGAGAGTVEDHHGQQHHHSHQSAAAAAFAVQQHHHQQLQLQQLQQQHQQH
LQQQQQQQQQQQQQQQQQQQQQQQQQQQERPGSSSSDMENDPTRQVPNASNNNIH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagctccgcacatgggtaatttcgatttcataatggaccatcaccatcaccat
caccacggtcgtgcgctcgaatcgtccgtgtcgccgccgacctccgtggtcatgcaacag
caacagcaatcgctccaacagcagcaacagcagcagcagcagcagcagcagcaacaacag
caacagcagcagcagctgcccggcaaggccgatcacatcaagcgcccgatgaacgcgttc
atggtgtgggcgaaaatccagcgacggctcatcgctcacgacaacccgaagatgcacaat
tcggagatcagcaagcgcctgggcgccgagtggaagctgctgaacgagaccgaaaagcgt
ccgtacatcgacgaggccaagcgtctccgggccctgcacatgaaggagcacccggactac
aagtatcgtccccggcgcaagcccaagatccaattgcacaacaacaacaacaacaacaac
aacaacatcagcggcgctcacaacaacaacggcggcatgctgcacggatccgccggcaac
aacaacctgcaccatcatcacgccgcgcaccacaaacagaccaacttccacgcgtttccg
gtggtgacggcgagcggcggtcccggcggcccggcaaacttcaacttcccgatgccgtac
ttctcggccagccaccatccggccctgcactcgttcgacagttactcgtccgcgggactc
gtcagtccgtacctgagcaccgccatgccgtcgttcgatcccatccacctgtccaagctc
gtggcccagcagcaggccgtcgtcgcccagtccggcggcggcggcaattccccgtcgccg
tcgtcgcagatggccggatctccgccacccgcggtcgacatcaacgcggcggtgaacggg
ctgcagcagccgttgcaaccgcacttgcaccagcagccgcagcaacagcaccatttgcaa
ccgccgcacgccaagaacggcggcgcggccgtggtaagttcgttttacaatcagttctat
ccgccggccgccggttcgggcaaggcgggaccttacccgcaccatccgatgagcattttc
ccgtcgcctttctcgttctacaacaacggcggcggcgccggtgccggcacggtcgaagac
catcacggacagcagcatcaccacagccatcagtcggctgccgcggccgcttttgccgtc
cagcagcatcatcaccaacagttgcagctgcaacagttgcaacagcaacaccaacagcat
ttgcaacagcagcagcagcagcagcaacaacagcaacagcaacagcagcagcagcagcaa
cagcaacagcagcagcaacaacaggagagacccggatcctcgtcgtccgacatggaaaac
gatccgaccagacaagttcctaacgcttccaataacaacattcattaa
DBGET
integrated database retrieval system
