Aphis gossypii (cotton aphid): 114125503
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Entry
114125503 CDS
T05869
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114125503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
114125503
NCBI-ProteinID:
XP_027844981
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All DBs
Position
X:46067188..46090821
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AA seq
1773 aa
AA seq
DB search
MLIDTTKTSWTFIPALLLLFSSAYVGAYYSSCDKSSCYPATGNLLIGRENHLKASSTCGL
KQRERYCIVNNLEDRKKCFWCDSRQPSQPNAKYSLSHRIDNIVHSSGSPNAQWWQSENGV
ENVTIQLDLEAEFHFTHLIITFKTFRPAVMLVERSYDFGNTWQVYRYFAYDCDSVFPNIP
KEPPRNLTEVVCDQRYSSVPPSSSGEVILRVLPPNLHHMYDDPYSPEVQNLLKMTNLRIN
FTKLHTLGDDLLDNRDEILEKYYYAITEMVVRGSCSCYGHASRCLPQDGTNSKPDMVYGQ
CECTHNTKGLNCESCEDFFNDFPWKPAIGRQTNACRRCNCNNHATSCHHDAAVFELTGRM
SGGVCDGCTDNTMGRNCEQCKQYFYQDPTKPFTDHDVCLPCDCDPGGSLDDGICDSKTDL
INGLESGRCHCKPNVEGRRCDMCKNGFWNFSESNPDGCQVCTCNTQGTVDNQGCNKETGE
CTCKRYVAGRDCNQCIPGFWGLSDSQDGCKPCDCDVGGAYDNMCDVLTGQCLCRPHLSGR
TCSVPEQNYFVGPVDTLVSEAELSNCGQDNCQVYIREPYRDGREDTWTGTGFMRVFDDAE
LVFDLKNIPATTNYEIVLRYEPQIPYDWDDVRITLERLKPIEPNSTCAEYELNYNAGDVR
SVLLSQDSRFAIASPPVCLEAKKEYKVKINFQRYNNRTINPSASILVDSLVLIPHVESMP
FFQGSPANEQRLEEYRRFKCKEAFYTIRKDHLLDSDVCQKYHYSVGFYYLDGAFSCECDP
TGSTSAICDSLGGKCSCKTNVVGRKCNRCAPGTYGFGPEGCKACDCNSVGALDNLCDVST
GQCKCRTQTYGRECDQCEPGSWNYPNCQRCMCHGHTDGCDSRTGVCLNCQGFTEGNNCDR
CIEGYYGDPRLGIDIPCRACPCPGTVESGHSYANRCALDSKTQDVYCECQAGYKGSRCNM
CDENYYGNPEVPGGTCRQCSCNNNVDITKTGNCDPHSGKCLQCLFNTEGDNCEVCRTGFY
GDAIHQTCTECVCDFLGSQSRVCNSTTGQCPCLPNVIGLTCDECKPNHWKIASGNGCEPC
NCDPVGSVSEQCNQFDGQCKCKPGFGGTQCNQCQTNYWGDPNKECYACDCNPEGSATQQC
NQTTGHCNCMLGIGGEKCDTCARGYLGKAPNCNPCGECFENWDQTQKELIEQTENVFKSA
SEIKATGTTGAYNNQFENMEKKISEIRNILQTTTKSSTDLQTLNNVIDQLRINLTTMDQL
NVVTKTIDNTMQRVILANLTLGNLNAKAINLKETAQSLKNNSTQLQERNVEGALNLTKEA
YDKAKTLKMEENAQDRLLSDAEHQCKRTELFFGRNVNSFNQGIKDNEVTLEKLNEEMNKL
YQEIPKLNQQICDKGGETCDKLCGGAGCGFCGGLSCEEGATTKAERAYSFAKEAQKHIRD
KEAKGEELFRGLSQANQELNLALANTKDISEESQRAKIQSQSILNESYSLIERHEKFLNP
SGVQSTDVAMKVEEVLKLNINLQPEQLRQLSEDINKTLSQPKNIDTIINETAGDLSLAKM
LNEDAEKKQMAAKNILQVAERVETALDEAESIQKKIDEGILITNQNIVDANNSITNIKTE
TGVTQDNVQKVLDDINVIENKLKTLQTGFLKNVRDANEVKSEAGTLIQEVEDTEKKASQL
LSLYNDASNKLDNRAQIAKTTKNNSQQLLEKASQLSANTTLKLRELGDAEQIIISQEESI
SKLSKDVDELYSMMSDNLNKISSQADHYRTCNN
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgacacgacgaaaacgtcgtggaccttcatcccggctctgctgttgctcttc
tcgtcggcttatgttggagcgtattattcatcgtgtgataaaagttcatgttacccggct
actggaaatctgttaatcggtagagaaaaccacttaaaagcatcttcgacttgtggtttg
aagcaaagggaaagatactgtattgtaaacaatcttgaagaccgcaaaaaatgtttttgg
tgcgattcaagacaaccgtctcaaccgaatgcaaaatattcgctaagtcacaggatcgat
aatattgtccattcgtctggtagccctaatgcacaatggtggcaatcagaaaacggagta
gaaaacgtcactattcaattggacctcgaggccgaatttcacttcactcatttaatcatt
acatttaagacttttcgcccagcagtaatgttggttgaaaggtcttacgatttcggaaac
acttggcaggtatataggtacttcgcttatgattgtgactcagtttttccaaatatacca
aaagaaccaccacgtaatttgaccgaagtagtttgcgaccagagatattcttctgtacct
ccttcttcaagtggtgaagtgattttaagagtattacctcccaatctacaccacatgtat
gatgatccgtattcaccggaagtacaaaatctattgaaaatgacaaatttgagaattaat
ttcaccaaacttcatacactcggagacgatttgctggacaaccgagatgagattttggaa
aaatattactacgcaatcacagaaatggtagtacggggtagttgttcgtgttacgggcac
gcgtccaggtgcttgccgcaagacggtacgaatagcaaaccagatatggtgtacggtcag
tgcgagtgtactcacaacaccaaagggcttaactgcgagtcttgcgaagactttttcaac
gacttcccgtggaaaccagctattggccgtcagacaaacgcgtgtagacgttgcaactgt
aacaaccatgcgaccagttgtcatcatgatgccgccgtatttgagttgactggacggatg
agtggtggcgtgtgcgacggatgcacagataacaccatgggtcgcaactgcgaacagtgc
aagcagtacttttatcaagaccccacgaaaccattcactgaccacgatgtctgcttgccg
tgcgattgtgatcctggtggttccttggacgatggaatatgtgattccaagactgatctt
atcaacggattagagtctggccgatgtcactgcaaaccaaatgtcgaaggtagacgatgt
gacatgtgcaaaaatggattttggaatttcagcgagtcaaacccagacggatgccaagtg
tgcacgtgcaacactcaaggaaccgtggacaatcaaggttgcaacaaggagacaggagaa
tgtacgtgtaagaggtatgtggccggcagggactgcaatcaatgtatccctggcttctgg
ggtttgtctgatagtcaagatggctgtaagccatgtgactgcgacgttggtggagcgtac
gacaatatgtgtgacgtcctcacgggacaatgcttgtgtcgaccacatttatcaggacgt
acctgcagtgtaccagaacaaaactattttgtcggtcccgttgacactttggtcagcgaa
gccgagttatccaactgcggacaagataattgtcaagtatatattcgagaaccctataga
gatggccgggaagatacatggacaggtacaggatttatgagagtgtttgatgatgccgaa
ttggtttttgacttgaagaatataccagctacaactaattacgaaatcgtgctcagatat
gaaccacaaattccttatgattgggacgatgtcagaattacattggaaagattgaaaccc
attgaacctaatagtacttgtgcagaatatgaattgaattacaatgctggagatgttaga
agcgttttattatctcaagattctagatttgctatcgcttcaccaccagtatgtttagaa
gcaaagaaagaatacaaagtgaaaattaatttccaaagatacaacaacagaacaattaac
ccatctgcatcaatactggtcgactcgcttgtcttaataccacatgtggaaagtatgcca
ttcttccaaggatcgccagccaatgaacaacgacttgaagaatatagacgttttaagtgc
aaagaagcattttacacaatccgcaaagatcatttacttgattctgatgtttgtcaaaaa
tatcattatagtgttggtttttattatttggatggagcattttcatgtgaatgtgatccg
accggttcaactagtgccatttgtgattcattgggtggaaagtgttcttgcaaaacaaat
gtagttggaagaaaatgtaatcgttgtgctcctggtacttatggattcggtccagaagga
tgcaaagcatgtgactgtaacagtgttggagctttggacaatttgtgtgatgtttcaact
ggacaatgtaagtgtcgaacacagacttatggaagggagtgtgatcaatgtgaaccaggc
tcatggaattatccgaactgtcaaagatgcatgtgtcatggacacactgacggatgtgac
tctcgtaccggagtatgccttaactgccaaggttttactgaaggaaataattgtgataga
tgtattgagggttattacggcgacccacgtttgggaatagacattccgtgtcgagcatgc
ccgtgtccaggaacagttgaatctggacattcttatgcaaatcgatgtgctttagattca
aaaacacaagacgtctactgtgaatgtcaagctggctacaaaggttctaggtgtaatatg
tgcgatgaaaactactacggaaacccggaagttcctggaggcacgtgccggcagtgttct
tgtaataataacgtagacataaccaagacaggtaactgtgatcctcacagtggcaaatgt
ttgcaatgcttgtttaacacagaaggagacaattgtgaagtttgtagaactggtttttat
ggtgatgctatccatcaaacgtgtacagaatgtgtgtgtgactttttgggatcacagtct
agagtgtgtaattctaccactggacaatgtccttgtttacctaatgtcattggattgact
tgcgacgagtgtaaacccaatcattggaaaattgctagtggaaatggatgtgaaccgtgc
aattgtgacccagtcggatctgtttctgaacaatgtaaccagtttgacggtcaatgcaaa
tgtaaaccaggttttggtggaactcaatgtaatcaatgtcaaacaaattattggggtgat
ccaaataaagaatgttatgcttgtgattgtaatcctgaaggatcagctacacaacagtgt
aatcagactactggacactgtaattgtatgttaggaataggtggagaaaaatgtgacact
tgtgcgagaggatatttaggaaaagctcctaattgcaatccatgtggagaatgttttgaa
aactgggatcaaacacaaaaagagcttatagaacaaacggagaacgtatttaaatcagca
tctgaaataaaagctaccggaactacgggcgcttataacaaccaatttgaaaatatggaa
aaaaaaatatccgagataagaaatatattgcaaacaactacaaaaagttcaacagatctt
caaacattaaataatgttattgatcaactcaggattaatctcactactatggatcaattg
aatgtagttacaaaaactattgataatactatgcaaagagttattttagctaatttaaca
ttaggaaaccttaatgcaaaagcaatcaacttaaaagaaactgcacaaagtttaaaaaat
aattcaacacaacttcaagaacgaaatgttgaaggtgctttaaatttaaccaaagaagca
tatgacaaagcaaaaacattaaaaatggaagagaatgcacaagatagattactatctgat
gctgaacaccaatgcaaaagaactgaattgttctttggacgaaatgtaaattcttttaat
caaggtattaaagataatgaagttacattggaaaaattaaacgaggaaatgaataaattg
tatcaagaaatccctaaattaaatcaacaaatttgtgataaaggtggtgaaacttgtgat
aagctttgtggtggagcgggttgtggtttttgtggtggtttatcatgtgaagaaggtgct
actactaaagcagaacgtgcctatagctttgctaaagaagctcaaaagcacatacgtgat
aaagaagcaaaaggcgaagagttgtttagaggtttatctcaagctaatcaagaattaaat
ttggcgttggctaatactaaagacatctcagaagagtcacagagagccaaaatacaatct
caaagcatcctaaatgaaagttatagtttgattgaaaggcatgaaaaatttttgaaccct
tcaggagttcaatctactgatgtcgcaatgaaagttgaagaagttctgaaattaaatatt
aacttacaacccgaacaattacgtcaactttcagaagacataaataaaacgttatctcaa
ccaaaaaatattgatacaattatcaatgaaactgctggtgatttgtcactagctaaaatg
ttaaatgaagatgccgaaaagaaacagatggctgccaaaaatatacttcaggttgctgaa
cgtgttgaaacagctttagacgaagcagaaagtatacaaaagaagatcgatgagggtata
ttaataacaaaccaaaatattgtggatgcaaataatagtataacaaatattaaaacagaa
acgggagttactcaagataatgttcagaaagtcttagatgacatcaatgttatagaaaat
aaattgaaaacgctacagaccgggttcttaaaaaatgttagagacgctaatgaagtcaag
tcagaagcgggcactttgatacaagaagtagaagatactgaaaagaaagcatcacaacta
ttatctttatataatgatgctagtaacaagttagacaaccgtgcacaaattgcaaaaacc
acaaaaaataattcacaacagttattagaaaaagctagtcaactgtcagccaatactact
ttgaaattgagagaactaggagatgccgaacaaataattatcagtcaagaagaatcaatt
tcaaagctttctaaggatgtagatgaattatatagtatgatgtcagataatttaaataaa
atcagttcacaagccgatcattatcggacatgcaataattaa
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integrated database retrieval system
