Aphis gossypii (cotton aphid): 114125544
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Entry
114125544 CDS
T05869
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ags04131
]
114125544
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ags04147
]
114125544
Membrane trafficking [BR:
ags04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
114125544
Exosome [BR:
ags04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114125544
Exosomal proteins of bladder cancer cells
114125544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
114125544
NCBI-ProteinID:
XP_027845043
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All DBs
Position
3:complement(11793039..11798523)
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AA seq
1232 aa
AA seq
DB search
MLTKFETKSARIKGLTFHSKRPWILASLHTGVIQLWDYRMCTLLDKFDEHDGPVRGISFH
SQQPIFVSGGDDYKIKVWNYTQRRCIFTLLGHLDYIRSTMFHHEYPWILSASDDQTIRIW
NWQSRACICVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNVAPGPGGLD
DHLRNPNATDLFGQADAVVKHVLEGHDRGVNWCSFHPTLPLIVSGADDRQIKLWRMNDSK
AWEVDTCRGHYNNVSCVVFHPKQELILSNSEDKSIRVWDMTKRTCLNTFRREHERFWVLA
AHPTSNLFAAGHDSGMIIFKLERERPAFTQFGNFLFYVKERFLHRLDFTTHKVNTVMQLR
GGGRTPIYSISYNPAINAMLVCTRNSSNLENSTYDLYQMPKESADSSVTEVPESKRSSGL
MAVWIARNRFAVLDKTHMLAVKNLKNELTKKNIGPNNIDEIFYAGTGLLLLRDPENLTLF
DVTQKRVLAQAKIAKCRYVIWANDGSLLAVLCKHNIYICNRKLEILCTIHENSRIKSGAW
DDCGAFIYTTSNHIKYALPDGGDYGIIRTLDLPIYITKVSGNQVFCLDRECRPRILNIDT
TEYKFKLALIKRKYEEVLHIVRNDRLIGQSIIAYLQQKGYPEVALHFVKDNKTRFSLALE
CGNIDIALEAARTLDDKVCWEQLGQAALLQGNHQVVEMCYQRTKNFDKLSFLYLITGNLD
KLRKMMKIAEIRKDVSGHYQGALLLGDCHERIKILNELGHKSLAYLTAATHGLDAEAESI
KEGYEGNLPTVTAGAKLLRPPAPVSQAESNWPLLTVSKGFFEGAILSAGKASGLIDTAIG
EDVGVEEEGWGAEADLGLEGRMSPTHSEAEEEAASAAAADGGGEDGWDVGDEEVELPPEV
LVSRQQDSDYFVAPQPAACPSLAWSANSQLAIDHVKSGDFENAFRLLNEQIGVTNFGPLK
SLFMDSYLKSCTSYTPLPTHPSLFVYPNRNWKDGGGGGKGQNNKPVLDVKLEHLLGELQA
CYQLTTAGKFPETVAKFRSILTAVPLLCVDTKQEVNEVVQLVHICKEYLVGLVMETARKE
HPKTTAEDQKRVAEMVAYFTHCDLQMSHKILTLRTAINVFYKIGNLNTAASFAKRLLELG
PRADVAQQARKMLQACDLNPVNKLQVAYDQHNPFSICAYSFVPIYKGKEEVKCPFCSASY
QPAHRGKVCNICQISSIGRESTGLKITAAHYR
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaatttgaaactaaatcggcccgtataaaaggccttacattccattcaaaa
cggccatggatattggctagtcttcatacaggggtaatccaattatgggactaccgtatg
tgtaccttgttagacaaatttgacgaacatgatggacctgtacgcggtattagttttcac
agccaacaacctatctttgtatctggtggtgacgattataaaatcaaagtatggaattat
actcaacgacgatgcatatttacattacttggtcacttggattacattcgttccacaatg
ttccatcatgagtacccttggatattaagtgcatctgatgatcagacaataagaatttgg
aactggcaaagccgtgcctgtatttgtgttttaactggccataaccattatgtcatgtgt
gctcagttccatccatctgaggatttagtggtctctgcatctttagatcagacagttcgt
gtttgggatatatctggattacgtaagaagaatgtagcccctggccctggaggactagat
gatcatttaaggaatccaaatgctacagatctatttggtcaagctgatgctgtagttaaa
catgtgcttgaaggtcatgaccgtggtgttaattggtgttcattccatcctactttgcca
cttattgtctccggtgctgatgatcgtcaaattaaattatggagaatgaatgattctaaa
gcatgggaagtagacacgtgccgtggacattataataatgtttcctgtgttgtgttccat
ccaaaacaagagcttattctgtcaaattctgaggataaaagtatacgtgtttgggatatg
acaaaaaggacatgtctcaatacatttagacgagaacatgaacgattttgggtacttgct
gcacacccaacctccaacttatttgctgcaggtcatgattcgggtatgattatattcaag
ttggaacgtgaaagacccgcatttacacaatttggtaatttcttattctacgtaaaagag
agatttttacatcgtcttgatttcactacccacaaagtgaacactgtcatgcaactaaga
ggtggtgggcgtacgcctatttacagtattagttacaacccagctataaatgcaatgctc
gtatgtacaagaaattcgtcaaatcttgaaaatagcacttatgatttatatcaaatgcct
aaagaatcagcagacagtagtgttacagaagtacctgagagtaagaggtctagtggtcta
atggccgtctggatagccagaaatcggtttgctgtgctagacaaaacacacatgttggct
gtaaaaaatttaaaaaatgaattaactaaaaagaacataggacccaataatatagatgaa
attttttatgctggtactggcttattattactacgtgatcctgaaaatttgactttgttt
gacgttacacaaaagagagtgttggctcaagctaagatagccaaatgtcgttatgtaata
tgggcaaatgatgggtctttactggccgttttatgcaaacataatatatatatatgtaac
agaaaattggaaattttatgtacaatacatgaaaattccagaataaaatcaggggcatgg
gacgattgcggtgcatttatatatactactagtaatcatattaaatatgctttgccagat
ggtggtgactatggaattatacgtacattagatctgcctatatacattacaaaagtcagt
ggtaaccaagtgttctgtttggacagggagtgtcgacctcgaatactaaatattgatact
acagaatataaatttaaattagcactcatcaaacgcaagtatgaagaagtgttgcacata
gttaggaatgatcggttaattggacaatccataatagcttacttgcagcagaaagggtat
ccagaagtagcattacattttgtcaaagacaacaagaccagattttcattagcactggaa
tgtggtaatatagacattgctttggaagctgctagaactttggacgataaggtgtgttgg
gaacaactgggccaggccgcattgctgcagggaaaccatcaggtagtggagatgtgttac
cagaggacaaagaactttgacaaactgtcatttttgtatctgatcaccggtaatttggac
aaactgagaaaaatgatgaaaatcgcggaaatacgtaaggacgtgtctgggcactaccag
ggtgcgctattgctgggtgactgtcacgaaagaatcaagatactaaacgaactaggtcac
aagtcgctcgcctacctaacggccgccacccacggtttggacgccgaagccgagtccatc
aaagagggctacgagggtaacttaccgacggtgacggccggcgctaagctgctcagacct
ccagcaccagtcagccaggccgagtccaactggcctctgttaactgtgtccaaaggtttc
tttgagggcgccatactatcggccggcaaggcgtcagggctcatcgacacggcgatcggt
gaggatgtgggcgtagaggaggagggttggggagccgaggctgacctaggactggaggga
cgcatgtcgcccacgcactcggaagccgaggaagaagcggcgtcggcagccgcagcggac
ggtggtggcgaggacggttgggacgtgggtgacgaagaggtggaacttccgccggaagtg
ctggtgtcccgacaacaagactccgactatttcgtagcgcctcagccggccgcttgcccg
tcactcgcatggtcggccaacagccagctggccatcgaccacgtcaagtcgggcgatttc
gaaaacgctttcaggctactcaacgagcagatcggcgtcaccaacttcgggccgctcaag
agcctgttcatggactcgtaccttaaatcgtgcacgtcgtacacgccgctgcccacgcac
ccgtcgctgttcgtgtaccccaaccgcaactggaaagacggtggcggcggcggcaaaggc
caaaacaacaagcccgtgctggacgtgaaactggaacatctgctcggcgaactgcaggcg
tgttatcagctgacgacggccggcaagttcccggaaacggtggccaagttccggtcgata
ctgacggccgtgccgctgctgtgcgtggacaccaagcaggaggtgaacgaggtcgtgcag
ctggtgcacatatgcaaggagtacctggtcgggctggtgatggagacggcccgcaaggag
cacccgaagaccacggcggaagaccagaagcgcgtggccgagatggtcgcctactttacg
cactgcgacctgcaaatgtcgcacaaaatcctcacgctccgcacggccatcaacgtgttc
tacaagatcggcaacctgaacacggccgcgtcgttcgccaaacggctgctggagctgggc
ccgcgcgccgacgtggcgcaacaggcgcgcaaaatgctgcaggcctgcgacctgaacccg
gtcaacaagctgcaggtggcctacgaccaacacaacccgttctcgatttgcgcctactcg
ttcgtgcccatctacaagggcaaggaggaggtgaaatgtccgttctgttcggcgtcgtac
cagcccgcgcacaggggaaaggtgtgcaacatatgtcagatatcgtccatcggccgagag
tccacgggactcaagataaccgcggcgcactaccggtga
DBGET
integrated database retrieval system
