Aphis gossypii (cotton aphid): 114125850
Help
Entry
114125850 CDS
T05869
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114125850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114125850
03019 Messenger RNA biogenesis [BR:
ags03019
]
114125850
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114125850
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114125850
U7-dependent histone pre-mRNA processing factors
114125850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
114125850
NCBI-ProteinID:
XP_027845827
LinkDB
All DBs
Position
1:83381218..83388313
Genome browser
AA seq
695 aa
AA seq
DB search
MLSVQDKKGEEIQISEEENDKLTIKPLGAGQEVGRSCIVMEFKGKKIMLDCGIHPGLQGL
DALPFVDLIEANEIDLLLITHFHLDHSGALPWFLLKTKFKGKCYMTHATKAIYRWLLSDY
IKVSNIGTEQMLYTEADLEKSMDRIETINFHEEKDVGGIRFCAYNAGHVLGAAMFMIEIA
GVKVLYTGDFSRQEDRHLMAAEIPPSRPEILITESTYGTHIHEKREERERRFTMLVNDIV
NRGGRCLIPVFALGRAQELLLILDEYWGLHPELHDIPIYYASSLAKKCMAVYQTYINAMN
DRIKRQIAVNNPFVFKHITNLKSIDHFEDIGPCVIMASPGVMESGLSRELFEMWCTDSKN
GVIIAGYVVQGTLAKAILSEPEDITTMTGQKLPLKMSVDYISFSAHTDYQQTREFINILK
PPHIVLVHGEQNEMQRLKSALVREYEENSEDIKVYNPRNTVGVDFYFTGEKTAKVMGEIA
VEKPAEDNVLSGVLLKKNFSYHIFASEDIPRYSDMLLSEIQQKQLHRFTASFTVLQNMLS
HLTGSVPEIIIPNKKLRVLNSVDVSVDKNFATLEWTTTPENDMYADIVVQVLMKIQSMNH
GDMKNVASVPYTEYDHMHFKECLIEILQEMFGEESVPKIFKGEKLFVAVDGKKANINLKN
LEVTCEDEVLQRMVQAAISRLHNTVTPLNVTNTTT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccgttcaagataagaagggtgaggaaattcagatatctgaagaagaaaatgat
aaacttactataaaacctctaggtgctggacaagaagttggtagatcatgcattgttatg
gagttcaaaggcaaaaaaattatgcttgactgtggaattcatccaggtcttcaaggttta
gatgcattaccatttgtggatctcattgaagcaaatgaaattgatttacttttgatcact
cattttcatttggatcatagtggagcattaccatggtttttactcaagactaaatttaaa
ggaaaatgttacatgactcatgcgactaaagccatttatagatggttactgtctgattat
attaaagtcagcaacataggaactgaacaaatgctttatactgaagctgatttagaaaag
agcatggatcgtatagaaacaataaatttccatgaagaaaaggatgttggaggtattcga
ttttgtgcttataatgcaggccatgtgttaggcgctgcaatgttcatgattgagattgcc
ggtgttaaagtgctgtatactggagacttttcaagacaagaagacagacatttaatggct
gctgaaatacctccttcgaggccagaaattcttattactgaatctacttatggaactcat
attcatgaaaaacgtgaagaacgtgaaagacgatttactatgcttgtcaatgatattgtt
aatcgaggtggaaggtgtttaattccagtttttgctttaggacgagctcaagaattatta
ttaatcttagatgaatattggggtctccacccagaacttcacgatattccaatatattat
gcatcttcattagctaaaaaatgtatggctgtttatcagacatatattaatgctatgaat
gatcgtataaaacgtcaaattgctgttaataatccatttgtttttaaacacattactaac
cttaaaagcattgatcattttgaagatattggtccttgtgttataatggcatcacctggt
gtcatggaaagtggtctttctagagagctttttgaaatgtggtgtacagatagcaaaaat
ggagttataattgccggttatgtcgtacaaggaacactagctaaggctattttatctgaa
cctgaagatatcacgactatgactggacaaaaattaccattgaaaatgtctgtagattat
atttcattttcggcacatacagattatcagcaaacacgtgaatttataaacattttaaag
ccaccacatattgtattggtacacggagaacaaaatgaaatgcaaaggctgaaatctgct
ttagttagagagtatgaagaaaattcagaagatattaaagtttataaccctcgaaataca
gtaggagtggatttttattttactggggaaaaaactgcaaaagtaatgggagaaatagct
gttgaaaaaccagctgaagataatgttttaagtggcgttttattaaaaaaaaattttagc
tatcatatttttgcttctgaagatatcccaaggtattccgacatgttattaagtgaaatt
caacaaaaacaacttcaccgatttacagcatcatttacagtattacaaaatatgttgtcc
catttgactggcagtgtacctgaaataattattcctaataaaaagttaagagtattaaat
tcagtggatgtctctgtggataaaaactttgccaccctagaatggactactacacctgaa
aatgatatgtacgcagatattgttgtacaagtattgatgaaaattcagtcaatgaatcat
ggggatatgaaaaatgtggcatcggttccatatactgagtatgaccatatgcatttcaaa
gaatgtttgattgaaatcttacaagagatgtttggtgaagaatctgtgccaaaaatattt
aaaggtgaaaagttgtttgtagctgttgacgggaaaaaagctaatattaatttaaaaaat
ttggaagtaacttgcgaagacgaggttttgcaacgaatggtacaagctgccatatctaga
ttacataatactgtaacgcctttaaatgttacaaatactacaacataa
DBGET
integrated database retrieval system
