Aphis gossypii (cotton aphid): 114126344
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Entry
114126344 CDS
T05869
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114126344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ags03009
]
114126344
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114126344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
UTP15_C
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
Beta-prop_TEP1_C
B-prop_COPA_B_2nd
WD40_RFWD3
NBCH_WD40
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
FCP1_C
Beta-prop_WDR75_2nd
EspG
U79_P34
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
114126344
NCBI-ProteinID:
XP_027846062
LinkDB
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Position
3:19753879..19757948
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AA seq
510 aa
AA seq
DB search
MTSFKKSFVKPFARPSELYTVEDSYWKKLTSPVLVKEFGPIDYVNFSRRAPYHFAISCSA
RVQVYNPVTKVVTKNLNKFKEAAYGATFRADGHLLCAGGEESVVRLFEVNTKSMLRQFRG
HKAAVHRTFFTRDGHHIASFSDDKTVSLWDISSQQISGHYEGYHNDYIRAGCVSPVSENI
VVSGGYDKQINMFDSRTKSVTMSVDHESPVESLIFLPSGSLLISAGGTEVRIWDVLAGKL
LAKLTQNHKTVTALCLAKQGTAIVTASLDKHVKIYNVSTFQLSHDITYPSAVLSIDISRD
DKTIVAGTVDGIVNITKRDTSVKHNNENKKRQARAAAIVQSDGIDMTVPIMQPDQMSKFD
SALRKFNYSQALDLVLVHAVAFKKPHITVYVFDELCRRNGLVQAISGRNSKQLAFLLNFI
VRYIGVRKLSKTLTHVASTVIDCYWDSFDTCTLEVRALLTKLHTVVENEILLTKRLLTID
GLVKMLLISSEVLPDATQTEKIDNKNVVKT
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttttaaaaaatcatttgtgaaaccatttgctcgccccagcgagttatatact
gtcgaagattcttattggaaaaaactcacaagtcctgttttggtcaaagaatttggtccc
atagactatgttaatttttcacgacgtgcaccatatcattttgcaatttcatgttctgct
cgagttcaagtttataatcctgttacaaaagttgtaactaaaaatctcaataaatttaaa
gaagctgcttatggtgcaacatttcgtgcagatggtcatttattatgtgctggtggtgaa
gaatctgttgtgagattatttgaagttaatacaaagtctatgttgagacagttcagggga
cataaagctgctgttcaccgtacatttttcacaagagatggacatcatattgcaagcttt
tcagatgacaaaactgtttctttatgggatataagtagtcaacaaataagtggacattat
gaaggatatcataatgactacatcagagcaggctgtgtttctccagtttcagaaaatata
gttgtttctggtggctatgacaaacaaattaatatgtttgattcaagaactaaatcagtt
actatgtcagttgatcacgaatcacctgtagaaagcttaatatttttaccttcgggcagt
ttactcatatctgctggtggtactgaggtccgaatatgggacgttttagctggtaagttg
ttggctaaactcactcaaaaccacaagactgtaactgcattatgcttggctaagcaaggt
acagctatcgtaaccgcctcattggacaagcatgttaagatttacaatgtatcaacattc
caactatcacatgacattacttatccgagtgctgtacttagtattgatataagcagagat
gataaaacaattgtagctggaacagtggatggcattgtgaacataactaaacgtgacaca
tcagtaaaacataacaatgaaaataaaaagcggcaagccagagcagctgcaattgttcaa
tctgatggaattgatatgactgtcccaataatgcaacctgatcaaatgagcaagttcgat
agtgctcttaggaaatttaattatagtcaagcattagatttagtcttggttcatgcagtt
gcattcaagaaaccccatataacagtttatgtgtttgatgaattatgcaggagaaatggt
ttagtgcaagcaatatctggcagaaattcaaaacaattagcatttttattgaattttatt
gttcgttacattggagttaggaagttatctaaaacattgacacatgttgcttcaacagtt
attgattgttattgggattcattcgacacttgcacccttgaagttcgtgcactgctcaca
aaactacatacagttgttgaaaatgaaatattattgactaaaagattgttaactattgat
ggattagttaaaatgttacttattagctctgaagtattacctgatgctactcagactgaa
aaaattgataataaaaatgttgttaaaacttaa
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