Aphis gossypii (cotton aphid): 114127007
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Entry
114127007 CDS
T05869
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114127007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ags03009
]
114127007
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114127007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
PEP5_VPS11_N
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
VPS8_N
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_Vps41
WD40_RFWD3
TAF1C_beta-prop
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
114127007
NCBI-ProteinID:
XP_027846883
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Position
X:complement(51902538..51906400)
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AA seq
875 aa
AA seq
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MSSSKIFLQNRALGYVSNDIPLVTRYINLRRENLIITCVGRAFHTYSSDRFQLLSVSPQH
ETDITCLAADSYLVYTSCGNNIYAWRRGIEVKHMYTGHKAAIKLLFPFAANLVSIDESGV
LKIWDVKSESLYKEIQLDFTATAICHPPTYTNKLLIGSAEGKLQLWNIKTGSMIYEFKGW
NSCVTSLEPAPAEDMMAIGLSNGKIILHNLKFDVTNISFTQDWGSVTRISFLIKRQLMIT
GSPKGTVVVWNLEEGKVDSLIIKAHHGPVCGLQCLPDEPLLVTSSSDNSLKMWRFDMSDG
SASLFKIREGHFKPPVSIRFHGADGASILSSGNDSSLRVFNTVTEIANKSFGRASYNRKA
SKKKGNKWADPLIMPPISTFTSETTRDKEWDSIVAVHRGIPTVTTWSFDKSKMGEHKLCH
ERFKKNVSGQKGISATCACLTHCGNFAVVGYSSGHIDKYNIQSGLHRGTYGEPIAHKCVR
GVYVDTLNQIMVSGGSDTFLKFWNFKKLNLLSKLELEDTVSLFSWHTESSFLAVALDNYN
ISLVDIDTRTIIRKFTGHRGPLTDLTFSPDSRWLVSSAMDSTIRTWDIPSSSMIDILKVD
TPCVSLTFSPTGSYLATAHADRLGIYLWFNKTLYNHVSLRPITEEDQTIEPLPLTGINQE
SLECPIDEDTDEYISKGQIENTITMSGLNDARWQSILNLDAVKKRNKPVQPPKAPAAAPF
FLPTIQSVDFQFDLNGVGKTDTNTKIPETVMQTVFAQQLLKATSSQDYQNLFDQLKLMGP
SALNYEVRSLSPEAGGTYELIIKFLNLLNEISIKNKDFELIQSYLGVFLKYNGRALAQRP
EAINSIEEISKHNAWEHLQNNFLLCLSIIEYMKNN
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccagtaaaatattcttgcagaaccgagctctcggatatgtcagcaatgatatt
ccactcgttacccgctacataaacctcagacgagaaaatctcataatcacatgcgttgga
cgtgcttttcacacatatagttctgatagatttcaacttctatcagtaagcccacaacat
gaaactgacataacttgtttagcggctgatagttatctggtttatactagttgtggaaat
aatatatatgcatggcgacgagggatagaagtgaaacacatgtatacaggtcacaaagca
gctatcaaattattgtttccatttgcggctaatttagtgtctattgatgaatcaggagtt
cttaaaatttgggatgtaaaaagtgagagtttatacaaagaaattcaattagacttcact
gcaacagctatatgccatccaccaacatatactaataaattattaattggctcagctgaa
ggaaaattacagctgtggaacattaaaacaggatctatgatttatgaatttaagggttgg
aatagttgtgtgaccagcttagaaccagctccagctgaagacatgatggcaataggattg
agtaatggaaaaattattttgcacaatttaaagtttgatgtaaccaacataagttttaca
caagattggggttcggttacacgtataagttttcttattaaacgacaattaatgataact
ggtagtccaaagggcactgtagtagtttggaatctcgaagaaggaaaagttgacagctta
attattaaagcgcatcatggaccggtttgtggtcttcagtgtttacctgacgaaccactt
cttgtgacttcgtcttctgataattctttgaaaatgtggcgttttgacatgtctgatggt
tcggccagtttatttaaaatacgtgaaggtcatttcaaacctcctgtttctattcgtttt
cacggggcggatggtgctagtattttaagttctggcaatgattcatcattgcgtgtcttc
aatacagtcactgaaattgcgaataaaagttttggacgtgcatcatataatcgtaaagct
tctaaaaaaaagggaaataaatgggctgatcctcttataatgcctccaatatctactttc
acatcagaaactacacgagataaagaatgggacagcattgttgctgtacatagaggtata
ccgactgtaactacttggtcatttgacaagagtaaaatgggagagcataagttatgtcat
gaaagatttaagaaaaatgtcagtgggcagaaaggaatcagcgccacatgtgcatgtctt
acgcattgtggtaattttgcagttgttggatatagttctggtcacattgataagtacaac
attcagtcaggcttacatagaggaacttatggagaaccaatagcccataaatgtgtacgt
ggagtctatgtagacacacttaatcaaataatggtatctggtggctctgatacattttta
aaattctggaatttcaaaaaattaaatttattatctaaattggagttagaagatacagtt
tcattatttagctggcacacagaaagttcattccttgcagttgctttagataattataac
attagtctagtcgatattgatactcgcaccatcataagaaagtttactggtcaccgaggt
cctttaactgatttgacatttagtccagattccagatggttagtttcatcagcaatggat
tcaaccattcgtacttgggacattccatcatcatcaatgatcgatatactaaaagttgat
acaccttgcgtttcattgacattttctcctaccggtagttatctggctacggcgcacgct
gaccgtttgggaatatatttatggtttaacaaaacattatacaatcacgttagtttacga
ccgatcactgaagaagatcagactatagagcctcttccattgactggaataaatcaagaa
tctttagaatgccctattgatgaagatacagatgaatatatctccaaagggcaaattgaa
aacaccataactatgagcggcctaaatgacgctagatggcagagtatattaaatttagat
gctgtcaaaaaaagaaacaaaccagtacaaccacctaaagctccagctgctgctccattt
ttcctgcctactatacaatcagtagactttcaatttgatttaaatggagttggtaaaaca
gatacaaatactaaaattccagaaacagttatgcaaactgtttttgctcaacaactttta
aaagctacttcgtcacaagattatcaaaatttatttgatcaattaaaattaatgggacca
tcagctttgaactatgaagtaagaagcttatcaccagaagcaggcgggacttatgaatta
ataattaaatttttaaatcttttaaatgaaatatcaattaaaaacaaagactttgagcta
atacaatcatatttgggtgtatttttaaaatataatggacgtgcattggcccagcgacca
gaagcaatcaatagtattgaggagatatcaaaacataatgcatgggagcatttacaaaat
aactttttattatgtttaagtattattgaatatatgaaaaataattaa
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