Aphis gossypii (cotton aphid): 114127092
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Entry
114127092 CDS
T05869
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ags03009
]
114127092
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114127092
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
Pre-60S particles
Helicases
114127092
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
Motif
Other DBs
NCBI-GeneID:
114127092
NCBI-ProteinID:
XP_027847027
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All DBs
Position
1:29786852..29790001
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AA seq
548 aa
AA seq
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MSHTPQINFHQMSIDDRILKAIANQGWTEPTLVQERGIPLLLEGKDMLVRARTGSGKTAA
FVIPVIQKILEFKDINPDDFSTQALILAPSKELCNQIFKNILQLTIKCSRVVKCVDISDQ
IDMKEQQPLLKIPPDVIVATPARALLHLQAKNFTLKKLQTLVVDEADLVFSFGFEEEIKE
VIKFLPKTYQAVLASATLSEDVLELKKLLLRNAVILKLQEPDLAPLSQLTHYKLNAEEED
KAVILYCCFKLKLVKGKTIVFVNSVDKCYKLKLFLEQFGIHTCVLNSELPASCRCHTINQ
FNDNIYDIIIASDEKFLDEEHEITSTKPSKRKHDKEFSIARGIDFQFVSIVINFDFPLDI
YSYIHRVGRTARGKNKGTAISFLNIREQNLLKDVEDYIKQGISEENDIFQEFNFKLEEVE
GFRYRAKDAWRAVTKIAVREARLKEIKFEMLNSKKLKRYFQENPRDLLSLRHDKALHTVK
LQDHMADVPDYMVPTSLKDYIKDQEEEDKGTKKKDKAYYKKKQVGYKKYHAKKANPLVGM
EYTGLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagccacacacctcaaattaactttcatcaaatgagtatagacgatcgtatacttaaa
gcgattgcgaatcagggatggacagaacccacactggttcaagaacgtggtattccgctc
ctgttggaaggtaaagatatgttggtgagggcaagaactggatctggaaaaacagcagca
tttgttatacctgtaatacaaaaaatattagaattcaaagatataaatcctgatgacttt
agtacacaagcattgatattagctccaagtaaagaactatgtaaccagatttttaagaat
atacttcagttaaccataaaatgttcaagagttgttaaatgtgttgatatatcggatcaa
attgatatgaaagaacaacagcctttattaaaaataccacctgatgttatcgtggctaca
ccagctagagcattgcttcatttacaagcaaaaaactttacacttaaaaaacttcaaaca
ttggtggttgacgaagcagatttggtattttcatttggctttgaagaagaaattaaagaa
gttataaaatttttaccaaaaacctatcaagctgttttggctagtgcaacattatcagaa
gatgttttagaattaaaaaagttgcttctacgaaatgctgtcatattaaaactgcaagaa
cctgatttggctccattgtcacaattgactcattacaagttgaatgctgaagaagaagat
aaagcagtaattttatactgttgttttaagttaaaactcgtgaaaggaaaaactatagta
tttgttaattctgtagataaatgttacaagctaaaattatttttggaacaatttggtatt
catacttgtgtattaaattctgaacttcctgctagttgtcgatgtcatacaattaatcaa
tttaatgataatatatatgacataataatagcatcagatgaaaaatttttagatgaagaa
catgaaataacttcaactaagcctagtaaacgcaaacatgataaagaatttagtatagca
agaggaatagattttcaatttgtgtctatcgtaatcaattttgattttcctttagatatt
tattcgtatatacatagagttggccgtacagcaagaggaaaaaataaaggcacagccata
tcttttttaaacataagagaacaaaatttattaaaagatgtggaagattacataaaacaa
ggtatttcagaagaaaatgacatattccaagaatttaattttaaattagaagaagttgag
ggatttagataccgggctaaagatgcttggcgagcagttactaaaattgccgtccgagaa
gctcgactaaaagaaataaaatttgaaatgttaaattcaaaaaaattaaaacgatatttt
caagaaaatcctcgtgatttattgtctttgaggcatgacaaagctttacatacagtgaaa
ctacaagaccatatggcagatgtccctgattacatggtgcctacttctttaaaagattat
ataaaagatcaagaagaagaagacaaagggactaaaaagaaagataaagcatattataag
aaaaaacaagttgggtataagaagtatcatgcaaaaaaagccaatcctctagtaggaatg
gaatacactggattgaagaaaacgtaa
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