KEGG   Aphis gossypii (cotton aphid): 114127414
Entry
114127414         CDS       T05869                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114127414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ags03400]
    114127414
DNA repair and recombination proteins [BR:ags03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     114127414
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 114127414
NCBI-ProteinID: XP_027847441
LinkDB
Position
2:complement(16801686..16804935)
AA seq 554 aa
MGPIPVDRIISISSEDQAHKAENILNVSDSHQTWRCKSGEKQATVILQFLKPSVISSIDV
GNDNSAFVEIFVGKSTSDEFQVLLVTSSLMTLHECKNGLNVNKVRFFDTDHLSSASKESW
DRVKIVCTQPYIKQSKYGLSFVTFHSKDIPEDIPQKEPIQSQSIQLGSFTLRNDDDSDNI
SSVGRLFSMRNENKDVVRMPDSPVNRLLAIHKKNLETAKLKNENSTNINIQTPLTNKKIS
KSPKDSVKLKNVDLNIKKKNTVTMEAVKNKVTKKKESSPSSLNLEPSRKKIKLIKNPLPV
TKPFSELLNNVVFVMSGYENPYRSNIRSKALEMGARYKHNWDLSCTHLICAFINTPKYRE
CKRQGAYRIVKSDWIDKCHSNKCRFPWRRYALDKLEQNKPESEDEICASTDSVETDDSDD
EWNSASTKPVPSTSQTNYSSVIEKNTTISPYDLDTDIDSDLDVPKDILADESILPLPFLD
SIFRNCLFYLSSSLNPLLKQECNRYIIALEGKLSEKDKCDYIVSTDANDLQIKNSVTPQW
IRDCYDARKILPLK
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggggccgattccagtcgatcgtattataagcattagcagtgaagaccaagcacacaaa
gcagaaaatatactcaacgtctctgattcacatcagacatggcgttgtaaatcaggtgaa
aaacaagctacggtcattcttcaatttttgaaaccgtctgtcattagttccattgacgtt
ggaaatgataattctgcttttgtagaaatatttgtaggaaaatctacttctgacgaattt
caagtactattggtaacttcttctttgatgacattgcatgaatgtaaaaatggattaaat
gttaacaaagtccgtttctttgacactgaccatctatcttcggcatctaaggaatcatgg
gatagagtaaaaattgtgtgtacacaaccatacattaaacagagcaaatatggtttatca
tttgtaacatttcattcaaaagatatacctgaggatataccacaaaaagagcctatccag
tcacaatctattcagttaggatcttttacattaagaaatgatgatgattctgacaatatt
tcatctgtgggtcgattattttctatgcgtaatgaaaataaagacgttgtacggatgcca
gattcaccagttaatcgtttacttgcaatacataaaaaaaacttggaaacagcaaaactt
aaaaatgaaaattctacaaatattaatattcaaacacctttaacaaacaaaaaaatctcc
aaatctccaaaagattctgttaaactaaaaaatgttgatttaaatattaaaaaaaaaaat
acagttacaatggaagctgttaaaaataaagttactaaaaagaaagaatcaagtccatca
tcactaaacttggaaccatccagaaaaaaaattaaattaattaaaaatccattaccagta
acaaaaccgttcagtgaattattaaacaatgttgtatttgtaatgagtggctatgaaaat
ccatatcgtagtaacattcgttcaaaagctttggaaatgggtgccagatacaaacataat
tgggatttgtcttgcacacatctaatatgcgcttttataaatactccaaaatatcgtgaa
tgcaaaagacaaggtgcctatcgcatagtaaaaagtgattggattgataaatgtcattca
aataaatgtcgatttccatggagaaggtatgctttggataaattggaacaaaataaacca
gaaagtgaagatgaaatttgtgcatctactgattcagttgaaactgatgatagtgatgat
gaatggaacagcgcctctacaaaaccagtaccctcaacatcacaaacaaactatagttca
gtaattgaaaaaaatactacaatatcaccgtatgatttagatactgacattgattctgat
ttagatgttcctaaagatatattagccgatgaaagcattttaccattgccatttttagat
agtatatttcgtaattgtttattttatttatcatccagtttaaaccctttgttaaaacaa
gaatgcaatcgctacattatagcacttgaaggaaagttgagtgaaaaggataaatgtgac
tatattgtttcaactgatgcaaatgatttacaaattaagaattctgttactccacaatgg
attagggattgttatgatgcaagaaaaatattacctttaaaataa

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