Aphis gossypii (cotton aphid): 114127620
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Entry
114127620 CDS
T05869
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ags04121
]
114127620
Ubiquitin system [BR:
ags04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
114127620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
114127620
NCBI-ProteinID:
XP_027847710
LinkDB
All DBs
Position
3:24946892..24962932
Genome browser
AA seq
1598 aa
AA seq
DB search
MLALWHENDRYSFEDSDRFEEDSLCTWSSEPESACINWRGWRKPTEQNTEDEPKKGVTAL
VELAAQCVALFLPYELVEQEFPPVPEELQLRIAFWSFPDSEDDIRLYSCLANSNSDEFLR
GQNLYTSNAVKDSVQIGFHLSANVHHGGRSVFNVAITFDRKKITTCNCTCEPMSYWCSHV
VAVCLHRIYCSEEVCLRAPVSESLSRLERDQLQKFAQYLISELPQQILPAAQRLLDSLLS
SQPTAINSTSGAPDPTAGASVNEQTTWFLDEKTLHNNIKKSLIKFCVPSPLVISDVNILS
QSVPPATAEWANLLRPLRGREPEGLWNLLSIVREMFRRNDENALHLLEVLTEEAIACDQI
MVWWFNTRVALHGGGTGGTKHTGPAGNTNTASHACALLCDEMVTLWRLAALNPSISPDHK
TSLKIKFKDWQEKIFTRVMKHRNLSNTKSINNFRQDTEIFVGFKPACEACDLDWGDYPLA
GITYGTNCCCDDGSCVHIKRTGTVTHFMGDHVNWNECSSSARGNSTQICLDECFLDLKNN
RHLHFGNRTHRSEYRSRSNMPMIRNHMPNNENRAMTNVYWVHMPRNISLPPPDDENASSN
TTSPEEFSTNESLSASASCTNFNASASSSASTQPSTPHQVNSTCNTSSESQSSDEGDRTA
AQKSTSSQTTPPPDVDEYNFLYYYDPKHLASTSSDSVKKTSDDPIPSTSKTSAAPITPLV
KLDAEWETMFARAEGLYGYGHTNEACILCVKLVDQFLKNPPNFIIEIPPSMIKGKRKKIN
PVSHHLSTLASEILQKCYFLCSVLAERKEYYLQAFKIGLYGLEMPRLPASTKPLEVKMAH
QEGEILNHLKRMLPLGKEQVSILQNRAKLLREGQYKTRGESLLPLNLASLIFECLAMCQS
PMQDKIADETLGFEASVAALGMKANISEADHPLLCEGIRRQRGELATNILIRYKNNPTRL
ALAMDKLLDREVHPFLQSAMDACWYQIRDPRNLPLIAMKNVANSNIHNQPLQCYNPNVTS
VPGELDTNIAVMTLNPIPPQTSSSCNIGLSSHRKDNNRYKSSKRLYPSQPNQASEANAHH
LFELGKTILSKVGGPIQTTVFSQPPLPTQPHRALHMCAFQLALYSLGLLNRVTPNWRSRN
YSSQVTWIADHAMEVGAPATLFLLGTWDGHLTPTEIANIADRMSRSHERNTVEAAAQLAL
SCLKHSVALNPNEITRAIVQCKEQSDHMMEIACLTVEMAAKGGGVFPEVLFSVAKHWFDL
YMRNSNPDEDNYMLQVDPREEFKCPYVYQTNYSMSVDTSQQPPPPLYAHQLMVPPQTSPA
HLYQLSYFPNQSMPQNSPPLNTQQPNTVMYYPYPSAPTSNQYSQYYSPYIQNPVQYQNAN
PQSQPQQGPPQYFVQPINQNSNQIRSPPQQAQANHCPPPNYRQIHHLTSAYRVGLLALDT
LARRVHEPNQAKYSRNPPFREDIQWLLRLSKKLGPNYTQQFCLAVTNSVVNPFTLHDVAM
EAVMYMGHFNPNPTMCPTLSPLVEKCHSMYIQLLHQKLYQLSSADYEEYVGILYSAYGAF
AMTPEGGNMFKDWLQSVRRSKSCKKELWTMITNMLPTT
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgctggctttatggcacgagaatgatcgctattcgtttgaggactctgaccgctttgaa
gaggattccctatgtacatggagcagcgaacctgaatctgcatgcataaactggagagga
tggagaaaaccgaccgaacagaacactgaagatgagcctaaaaaaggagttacagcacta
gttgaattagctgctcaatgtgtcgccctatttttaccttatgaacttgttgaacaagag
tttccacctgtaccagaagaacttcaacttcgcattgccttttggagctttcccgatagc
gaagatgatattcgcttgtattcgtgtctggccaactcaaactctgacgaatttttacgt
ggtcagaatttgtacacatcaaatgctgttaaagactctgtacaaattggatttcatttg
agtgctaatgttcatcatggcggccgcagcgtgttcaatgtggcaattacatttgaccga
aaaaaaataacaacatgtaattgtacttgtgaacctatgtcatattggtgttctcatgtt
gttgccgtctgtttacatagaatatattgttcggaagaagtttgtttaagagcacctgtt
agtgagagcctttccagactagaacgggatcaactacaaaaatttgcacaatatctgata
agtgagttacctcagcagatattacctgctgcacaacgattactggattcactgttgtct
tcacaaccaactgctattaattctactagtggagcaccagatccaactgcaggtgcatct
gtaaatgaacaaacaacatggtttttagatgaaaaaacattgcacaacaatattaaaaaa
agtttgatcaaattttgtgttccttcacctttagttattagtgacgtaaatattctatca
caatctgtaccacctgctactgcagaatgggcaaatctattgcgtccgttacgtggtcgt
gaacctgagggcttatggaatttactatcgattgtaagagaaatgtttcgtagaaatgat
gaaaatgctctacatttattggaagtgctaacagaagaagctattgcatgtgatcaaatt
atggtttggtggtttaatacaagagttgctttacatggcggaggaactggaggaactaag
catactggtccagctggcaataccaacactgcatctcatgcttgtgctttactttgtgac
gaaatggtaactctgtggcgtttagcagctttaaatccaagtatttcgcctgatcacaaa
acttcattaaaaattaagtttaaagattggcaagaaaaaatattcacaagagtgatgaaa
cacagaaatttgtcaaacactaaatcaataaataattttcgccaagatacagagattttt
gtgggtttcaaaccagcttgtgaagcttgcgacttagattggggagattatccattagct
ggaatcacttatgggactaattgctgttgtgatgatggttcttgtgtgcacattaaacga
acaggaacagttacacattttatgggagaccatgtgaactggaatgaatgtagttcatct
gcaagaggaaattctactcaaatatgcttagatgaatgtttcttggatttaaaaaataat
cggcatttgcactttggaaatagaactcatcgatctgagtaccgtagcagatctaacatg
cctatgattcgcaatcatatgccaaataatgaaaatagagcaatgacaaatgtttactgg
gtgcacatgccaagaaatatatcattacctccaccagatgatgaaaacgcaagcagtaat
actactagtcccgaagaattttcaaccaatgagtctttaagtgcatcagcgagttgtaca
aacttcaatgcatctgcaagttcctcagctagtacccaacctagtactcctcatcaagtc
aatagtacatgtaacacatcatctgaaagccagagcagtgatgaaggtgaccgaacagct
gcacaaaagtctacttcttcccagactactcctccaccagatgttgatgaatacaatttc
ctttactattatgacccaaaacatttggcatcaacatcgtcagactcagtaaaaaaaaca
tctgatgatccaataccatctacatccaaaacgtctgctgcacctattactccattggta
aaattagatgcagagtgggaaacaatgtttgcaagagcagaaggattgtatggttatggt
catacaaatgaagcttgtatactttgtgtaaaacttgttgaccagtttttaaaaaatcca
cctaattttataattgaaataccaccatcaatgataaaaggaaaaagaaaaaaaattaat
ccagtcagccatcatttgtctacattagcatcagaaattctacaaaaatgctattttttg
tgttctgttttggccgaaagaaaagaatattatttacaagcatttaaaattggtttatat
ggattggagatgccaagactaccagctagtacaaagcctttagaagtaaaaatggctcat
caagaaggggaaattttaaatcatttaaaacgcatgttgccattaggtaaggaacaagtg
agcattctccaaaatagagcaaaacttttgcgtgaaggacaatacaaaacacgtggtgaa
tcattattgccattaaatctggcttcattaatctttgaatgcttggcaatgtgtcagtcg
cctatgcaagataaaattgctgatgaaactttaggttttgaagcatctgtagccgcttta
ggcatgaaagccaacattagtgaagcggatcatccattgctctgtgaaggaattcgcaga
caaagaggtgaattggcaacaaacatattaatccgttacaaaaataatcctacacgtttg
gctcttgctatggacaaactattagatagagaagttcatcctttcttacagtcggcaatg
gacgcttgttggtatcaaataagagatcctaggaatttaccattaatagctatgaagaat
gttgcaaacagtaatattcataatcaaccattacaatgttataatccaaatgtaaccagt
gtacctggagagttagacacaaacatagctgttatgacgttaaatccaataccacctcaa
acgtctagtagttgtaatataggattgtcctctcatagaaaagataataacagatataaa
agtagtaaacgtttatatcccagtcaaccaaaccaagcttccgaagctaatgctcaccat
ttatttgaattgggtaaaaccattctgagcaaagtaggcggaccaatacaaactacagta
ttttcacaacctccattaccgacccaaccacatcgcgctctacacatgtgtgcattccaa
ttggccttgtattctttgggtcttctcaaccgtgttacaccaaactggcgaagtcgtaat
tattcatctcaagtcacatggattgctgatcatgcaatggaagtaggtgcaccagctaca
ctgttcttactaggtacatgggatggtcatttgactccaaccgaaatagcaaatattgct
gatagaatgtctagaagccatgaacgtaatactgttgaggcagcagcacaattagcattg
tcgtgtttaaaacattcagttgctctcaatccaaacgaaataacaagagctatagtacag
tgtaaagaacaatctgatcacatgatggaaattgcttgtctgactgtagaaatggcagcc
aaaggtggaggagtttttcctgaagttttatttagtgtagctaaacactggtttgactta
tatatgaggaattctaatccggatgaggataattacatgcttcaagttgatcccagagag
gaattcaaatgcccttatgtttatcaaaccaactattcaatgtcagttgatacatctcaa
caaccaccacctcctctttatgcccatcagttgatggtgccaccacaaacatcaccagct
catctgtaccaactatcatactttcctaaccaatcaatgcctcaaaattcaccaccactc
aatacccaacagcccaatacagtaatgtactatccatatccatctgcacctacgtcaaat
caatattctcagtactattctccatatatacaaaatcctgtacaatatcagaatgcaaat
cctcaaagtcaaccacagcaaggacccccacaatattttgttcagccaatcaatcaaaat
agtaatcaaattagaagtccaccgcaacaagcacaagcaaaccattgtccaccgccaaat
tacagacaaattcatcatttgacgtctgcataccgtgttgggctattggctctagatacg
ttggctagacgtgttcatgaacctaatcaggcaaagtattctagaaatccacctttcagg
gaagacatacagtggttattgcgtttgtcgaaaaaactaggacctaattacactcaacag
ttttgtttggctgtcactaacagcgtagtgaatcctttcacactacacgatgtagcaatg
gaggctgttatgtacatgggacattttaatcctaatcctactatgtgccccaccttaagt
cccttggttgaaaaatgtcattctatgtatattcaacttttacatcaaaaattatatcag
ttatcatcagcagattacgaagagtatgtcggaatactttactctgcttacggtgcattt
gcaatgacaccagaaggtggtaacatgttcaaggactggttacaatctgttagaagatct
aaatcatgtaaaaaagaactatggacaatgataacaaatatgcttcccactacatga
DBGET
integrated database retrieval system
