Aphis gossypii (cotton aphid): 114128215
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Entry
114128215 CDS
T05869
Name
(RefSeq) chromatin-remodeling complex ATPase chain Iswi isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114128215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114128215
03036 Chromosome and associated proteins [BR:
ags03036
]
114128215
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
114128215
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
114128215
RSF complex
114128215
WICH complex
114128215
B-WICH complex
114128215
NORC complex
114128215
BRF complex
114128215
NuRF complex (fruit fly)
114128215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
CHDII_SANT-like
DBINO
Myb_DNA-binding
DUF4800
AAA_14
Motif
Other DBs
NCBI-GeneID:
114128215
NCBI-ProteinID:
XP_027848482
LinkDB
All DBs
Position
2:51586319..51594525
Genome browser
AA seq
1048 aa
AA seq
DB search
MDSPDMEIEDDDYEPAKNTKSPGKKENLNNSKKENTNNSGSEDEVSPSKEKDGKVFGAKV
ETDRGKRFDYLLKQTEIFAHFMTANQKKDGSSTASASGNTPKKAKGRPRKPKAETGDSAD
LRHRQTEQEEDEELLKESLAADKYITQFDESPYYIQNGELRDYQVRGLNWMISLYENGIN
GILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVIVPKSTLQNWVNEFKKWCPTIRTVCM
IGDRDARVKFIRETFIPGDWDVCITSYEMIIRERAVLRKIQWRYLVIDEAHRIKNEKSKL
SEIIREFETTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSDDFDSWFNTNNCLGDNAL
IERLHAVLRPFLLRRLKSEVEKRLKPKKEVKVYVGLSKLQREWYTKVLMKDIDVVNGAGK
VEKMRLQNILMQLRKCSNHPYLFDGVEPGPPYTTDEHIVFNCGKMVVFDKLLKALKEQDS
RVLVFSQMTRMMDILEDYMHWKGYNYCRLDGQTPHEDRQRQINEYNEPNSKKFVFILSTR
AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVER
AEVKLRLDKLVIQQGRLIDNQKNTLNKDEMLNMIRHGANHVFQSKDSEITDEDIDTILRK
GEEKTEEMKQKLESLGESSLRNFTLDAQTESSLYTFEGEDYREKQKLTGIGNWIEPPKRE
RKANYAVDAYFREALRTSEPKQPKAPRPPKQPLVQDFQFFPTRLFDLLDQEIYYYRQTVG
YKVPKNSELGADAAKIQKEEQKKIDEAQPLTEEEQAEKEVLLTKGFTNWNKRDFNQFIKA
NEKYGRDDIDNISKEVEGKTAEEVREYSAVFWERCNEFQDIDRIMGQIERGESKIQRRAS
IKRALDAKMTRYRAPFHQLRISYGANKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAA
IRCAPQFRFDWFIKSRTANELQRRCNTLITLIERENQELEEKEREQKKLIKKNLKPAPSP
APVKKKADKVDKADVGDPKSPVPKKKKK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggatagtcctgacatggaaattgaagacgacgattatgaaccggctaaaaatacaaaa
tcacctggcaaaaaagaaaatttgaataattcaaaaaaggagaatactaacaattctggg
tctgaagatgaagtatctccttccaaagaaaaagatggaaaagtttttggtgctaaagtt
gaaactgaccgtggaaagagatttgattatcttctcaaacaaacagaaatctttgctcat
tttatgacagctaatcaaaaaaaggatggatcaagcactgctagtgctagtggaaacacg
ccaaaaaaagctaagggtagacctcgtaaacctaaagctgaaactggagattcagcagac
cttcgtcatcgccaaaccgaacaggaagaagatgaagagttattaaaggaatcattggca
gctgacaagtacatcacacagtttgatgaatctccatattatatacagaatggggaacta
cgtgattatcaagtacgtggtttgaattggatgatatcattgtatgaaaatggaattaat
ggtattctggctgatgaaatggggcttggtaaaactttacaaacaatatcacttttagga
tacatgaagcattacagaaatatacctggacctcatatggttattgttcctaaatcaaca
ttacaaaattgggtaaatgaatttaagaaatggtgtcctacaattcgaactgtttgtatg
atcggagacagggatgcacgggttaaatttattcgtgagacttttatacctggagactgg
gatgtttgtattacatcttatgaaatgattattcgcgaaagagctgtattacgtaaaatt
caatggagatatttagtaattgatgaagctcatagaataaaaaatgaaaaaagtaaacta
tccgaaataattagggagtttgaaactacaaatcgattattgttaactggtacaccattg
caaaataatctgcatgaattgtgggcattattgaatttcttgctgccagatgtatttaat
tcatcagatgattttgattcttggtttaatacgaacaattgccttggggataatgcctta
attgaacgactgcatgctgtattaagaccatttcttttaagaagattaaaatctgaagtg
gaaaaacgtctgaaacctaaaaaagaagtcaaagtttatgttggcctaagtaaattacaa
agagaatggtatacaaaagtattgatgaaagatatagatgtagttaatggtgctggcaaa
gtagagaaaatgagactacaaaacattcttatgcagctacgaaagtgcagtaaccatcca
tatctttttgatggtgttgaaccaggcccaccttatacaactgatgaacatattgttttt
aactgtggcaaaatggttgtatttgataagttattgaaagctttaaaagaacaagactcc
cgtgtacttgtgtttagtcaaatgacacgtatgatggatattttagaggattacatgcac
tggaaaggatataattattgtcgattagatggtcaaacccctcatgaagatcgccaacgt
caaattaatgaatacaatgaaccaaatagtaaaaagtttgtttttatactttctactcga
gctggtggtttaggtattaatttagctactgcagatgttgttattatatatgactctgat
tggaatcctcaaatggacttacaagcaatggatcgagctcatagaattggacaaaaaaaa
caagttagggtattccgtcttatcactgaaaatactgttgaagaaaaaattgttgaaaga
gctgaagttaaacttcggctggataaattagttatccaacaaggtcgattgatagataat
cagaaaaataccttaaataaagatgaaatgttaaatatgatcagacacggtgcaaatcat
gttttccagtctaaagattctgaaattactgatgaagatattgatactattttacggaaa
ggtgaagaaaagacagaagaaatgaaacaaaagttggaatctttaggagagtcgtcattg
agaaattttacattagatgctcaaacagaatcatccttgtatacatttgaaggagaagac
tatagagaaaaacaaaagttgactggtattggaaattggatagaaccacctaaacgtgaa
cgcaaagctaattatgctgttgatgcctattttcgtgaagcacttagaacatctgaacct
aaacaacctaaagcacctcgtccacctaaacagccattggttcaagatttccaatttttc
cctactcgtttatttgatttacttgatcaagaaatttattactacagacaaacggttgga
tataaagtaccaaaaaattcagaattaggtgctgatgcggctaaaatacagaaagaagaa
caaaaaaaaatagatgaagcacaaccactcactgaagaagaacaagcagaaaaagaagtt
ttattaacaaaaggattcacaaattggaataaacgtgattttaaccaatttattaaagct
aatgaaaaatatggcagagatgacattgataatatatctaaagaagtagaaggtaaaaca
gctgaagaggtaagagaatacagtgctgtgttttgggaaagatgtaatgagttccaagat
attgatagaattatggggcaaatagaaagaggagaatccaaaatacaacgccgagccagc
attaaaagagctttggatgctaaaatgaccaggtatagggctccatttcatcaattacgc
atttcatatggagcgaacaaaggcaaaaattatactgaggaagaagacagatttttagtt
tgcatgcttcataaacttggatttgataaagaaaatgtatatgaagaattaagagcagct
ataagatgtgctcctcaatttagatttgattggtttattaaaagtcgtactgctaatgaa
ttacaaagacggtgtaacacattaattacactaatagagcgagaaaaccaagaattggaa
gaaaaagaaagagaacagaaaaaattgattaaaaaaaacttaaagccagcaccatctcct
gctccagttaaaaagaaagctgataaagttgataaagctgatgtaggagatcccaaatca
ccagttccaaaaaaaaagaaaaagtaa
DBGET
integrated database retrieval system
