Aphis gossypii (cotton aphid): 114128229
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Entry
114128229 CDS
T05869
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114128229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114128229
03041 Spliceosome [BR:
ags03041
]
114128229
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114128229
Spliceosome [BR:
ags03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114128229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
EIF3I
NBCH_WD40
PQQ_3
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_DCAF12
PQQ
Motif
Other DBs
NCBI-GeneID:
114128229
NCBI-ProteinID:
XP_027848504
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Position
2:51538744..51541008
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AA seq
336 aa
AA seq
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MVDSKYYTTILSQTFSPCGNYLITGNNYGILTVYNLKNELQSGVDFKDQHLSAGGRSYEF
EMIRKMQINSMESGEKFLIIGGVGLIVGVDWETIIDSNFGENSKIEPLSISWSINIPSPK
DSMLAIDVNCLILNKDDNVLYAGCGDNTVYAFNLECGDVTQKFEGHSDFIHSIDKLDDTI
VSASEDGSVLFWDVRCKEYLSKIIPSNNPEIKRPNLGNWVGSVTITNDWMLCGGGTKLSL
WNRSMAAPMTVYNCVEDSGIHVTKLMDETLYAGGCSKYFYQLSFTDEILCKIETSPVTVF
SCVNQENPFKVTCLAGSSYKIDICTNLNYKMTTLGI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggttgatagtaaatattacactacaattttatctcaaacattttctccttgcggaaac
tatttgattaccggtaataattatggaatattaacagtctacaatttaaaaaatgaattg
cagtcgggagtcgacttcaaagatcaacatttatcagctggaggtcgatcctatgaattt
gagatgatacgtaaaatgcaaataaacagcatggaatctggtgaaaaatttttgataatt
ggtggtgttggtcttattgttggagtggattgggaaactattattgatagtaattttggt
gaaaactcaaaaattgaacctctcagtattagttggagtattaatattccatcacccaag
gattcaatgttagcaatagatgtaaattgtttaatattaaacaaagatgataatgtctta
tatgcaggatgtggtgacaatactgtttatgcatttaatttagaatgtggtgatgttacg
cagaaatttgaagggcatagtgattttattcattctattgataaattagatgatacaatc
gtctcagctagtgaagatggatctgtcttgttttgggatgttcgctgtaaagaatattta
tcaaaaatcattcccagcaataatccagaaattaaacgtcctaatcttggaaattgggtt
ggatctgttacaatcactaatgattggatgttatgtggtggaggaactaaactgtcatta
tggaatcgatcaatggctgctcctatgacagtatacaattgtgttgaagattccggaata
catgttaccaaacttatggatgaaacattatacgctggaggatgctcaaaatatttttat
cagttatcatttactgatgaaattttgtgtaaaatcgaaactagtccagtgactgttttc
agttgtgttaaccaagaaaatccattcaaagtaacatgtcttgcaggttccagttataaa
atagatatttgtaccaatttaaattacaaaatgactacacttggaatttag
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