KEGG   Aphis gossypii (cotton aphid): 114128333
Entry
114128333         CDS       T05869                                 
Name
(RefSeq) ATP-dependent RNA helicase WM6
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03013  Nucleocytoplasmic transport
ags03015  mRNA surveillance pathway
ags03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114128333
  09122 Translation
   03013 Nucleocytoplasmic transport
    114128333
   03015 mRNA surveillance pathway
    114128333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ags03019]
    114128333
   03041 Spliceosome [BR:ags03041]
    114128333
Enzymes [BR:ags01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     114128333
Messenger RNA biogenesis [BR:ags03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114128333
Spliceosome [BR:ags03041]
 Complex C
  Other components
   EJC/TREX
    114128333
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114128333
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 Utp25_C P-loop_SecA Ned1_M
Other DBs
NCBI-GeneID: 114128333
NCBI-ProteinID: XP_027848623
LinkDB
Position
3:complement(44725151..44727054)
AA seq 424 aa
MADADDLLDYEEDEQNETVESDDKKQVAKKEVKGNYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAMLGMDILCQAKSGMGKTAVFVLSTLQQLEVYESEVYALVLCHTR
ELAFQISKEFERFTKYLPAVKVSVFFGGVPITKDEDTLKNNKPHVVVGTPGRILELIRKK
KLVLNNLKHFILDECDKMLEILHMRSDVQEIFKNTPFNKQVMMFSATLSKDIRPVCKKFM
QQPLEVYVDDDAKLSLHGLQQYYVKLTEKEKNKKLFDLLDELEFNQVIIFVKSVQRCVVL
TELLNEQNFPSVAMHGGMSQQDRLKFYQEFKDFQKRILVATNLFGRGMDIERVNIVINYD
MPEDTDTYLHRVARAGRFGTKGLAITFICEETDAKVLNSVQDRFDVTIGRMPNEIELSSY
VERK
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcggatgctgatgatcttttggattacgaagaagacgaacagaacgagaccgttgag
agcgatgacaagaaacaagtcgccaaaaaagaagtaaagggtaactatgtgtccatacac
agttcgggtttccgtgattttctcttaaaaccagaaattctaagagcaattgtcgactgt
ggtttcgaacatccgtccgaagtgcagcacgagtgtataccacaggccatgttgggtatg
gatattctatgccaagccaaatctggtatgggtaaaacagccgtgtttgtcttatccact
cttcagcaattagaagtatacgagagtgaggtatacgctttggttttatgccataccaga
gaattggctttccagataagtaaagaatttgagcgcttcaccaaatacttgccggcagtc
aaggtcagtgttttctttggtggtgtgcccattacaaaagatgaagatacacttaagaat
aacaagcctcatgtagtggttggcaccccgggtcgcatattagaactaatcagaaaaaag
aaattggttctcaataatttgaagcattttattttggatgagtgtgataaaatgttagaa
atcttacacatgcgaagtgatgtccaagaaatatttaagaatacaccattcaacaaacaa
gttatgatgttcagtgccacacttagcaaagatatacgacctgtctgtaaaaagtttatg
cagcaaccattggaagtatatgttgacgacgatgccaaactatcattacacggcctccag
cagtactatgttaaactcactgaaaaggaaaaaaataagaaattgtttgatcttctagat
gaattagaatttaatcaggttatcatttttgttaaatctgtccaacgttgtgtagtttta
acagagctgttaaatgaacaaaatttcccatctgttgccatgcatggtggtatgtcccaa
caagatcggttaaagttttaccaagaattcaaagattttcaaaaacgaatattagtggct
accaatttgtttggtcgaggaatggatattgaacgagtgaacattgttattaattatgat
atgcctgaagatacagacacttatttacatagagtagcaagagctggacgttttggtacc
aaaggattagcaattacattcatttgtgaagaaactgatgcaaaagttttgaatagtgtt
caagatagatttgatgtcaccattggtcgaatgcctaatgaaatagagctcagttcttat
gttgaaagaaaataa

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