KEGG   Aphis gossypii (cotton aphid): 114128560
Entry
114128560         CDS       T05869                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03030  DNA replication
ags03410  Base excision repair
ags03420  Nucleotide excision repair
ags03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114128560
   03410 Base excision repair
    114128560
   03420 Nucleotide excision repair
    114128560
   03430 Mismatch repair
    114128560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ags03032]
    114128560
   03036 Chromosome and associated proteins [BR:ags03036]
    114128560
   03400 DNA repair and recombination proteins [BR:ags03400]
    114128560
DNA replication proteins [BR:ags03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    114128560
  DNA Replication Termination Factors
   ELG1-RFC complex
    114128560
Chromosome and associated proteins [BR:ags03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    114128560
DNA repair and recombination proteins [BR:ags03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     114128560
  Check point factors
   HRAD17(Rad24)-RFC complex
    114128560
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA AAA_lid_RFC1 Rad17 Rep_fac_C AAA_22 AAA_11 Hda_lid AAA_2 ABC_tran
Other DBs
NCBI-GeneID: 114128560
NCBI-ProteinID: XP_027848899
LinkDB
Position
1:58942495..58945143
AA seq 355 aa
MSLWADKYRPNSLQKVDYHLDQAQHLTNLVNQGDFPHLLFYGPNGAGKKTRILALLRQLY
GPGVERLRTEHMNFMTPSNKKFEIMTVASNYHIEVNASDAGMYDRIVVMELIKTVAQTHQ
LDSTKQRHFKVILLTEVDRLTKEAQQALRRTMEKYMATCRIILCANSIGQVIPAIRSRCL
AVRVPAPTHEDICKILKTICKKEGLTLPDELALIISQNCERNLRRAILMLEASKVKQYPF
DVKQSVVVPDWQLYIGDTAKQILSQQTPGKLLEVRSMLYELIVHGIPTNVIFKFLLKELV
KNCDVSLKHDIVEIASFYEHSLLKGNKTMFHLEAFVAKFMLLYSKFMEESLNGIF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtctgtgggctgataaataccgacctaattctttacaaaaagttgattaccacctg
gatcaagctcaacatttaactaaccttgtaaatcaaggcgattttccacatctactattc
tacggacctaatggtgctggaaaaaagactcgtattttagcattgttacgacaactgtat
ggccctggtgtcgaaaggttacgcactgaacacatgaacttcatgactccttcaaataag
aaatttgagataatgactgttgctagcaattatcatatagaagtaaatgctagtgatgct
ggtatgtatgatcgcattgtagttatggaactcataaaaactgttgctcaaactcatcaa
ttagattcaactaagcaacggcattttaaagttatcttattaactgaagtggacaggctt
actaaagaagctcagcaagccttgcgacgaacaatggaaaaatatatggctacttgtcgt
attattttgtgtgccaattccattggtcaagtgattccagccatacgtagtagatgttta
gctgtgcgtgttccagctcctactcatgaagatatttgtaaaattttgaaaacgatttgc
aaaaaagaaggattaacattaccagatgaattggctttaattatctctcagaattgtgaa
cgtaacttaaggcgagctatattaatgttagaagctagtaaagtaaaacagtatcctttt
gatgtgaaacaaagtgttgttgtaccagattggcaactttatattggcgatactgccaaa
caaatactaagccaacaaactcctggaaaattgcttgaagttcgatctatgctttatgaa
ttgattgttcatggcattccaacaaacgtgatttttaaatttttacttaaagagttggtg
aaaaactgtgacgtttcgttgaaacacgatattgttgagattgcatcgttttatgaacat
agtttattaaaaggcaataaaaccatgtttcatttagaggcatttgtcgccaaatttatg
ttactttattcaaaattcatggaagagtcattaaatggtatattttaa

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