Aphis gossypii (cotton aphid): 114128811
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Entry
114128811 CDS
T05869
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03008
Ribosome biogenesis in eukaryotes
ags03013
Nucleocytoplasmic transport
ags03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114128811
03015 mRNA surveillance pathway
114128811
03008 Ribosome biogenesis in eukaryotes
114128811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114128811
03009 Ribosome biogenesis [BR:
ags03009
]
114128811
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114128811
mRNA cycle factors
Stress granule specific factors
114128811
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
114128811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_9
Motif
Other DBs
NCBI-GeneID:
114128811
NCBI-ProteinID:
XP_050058020
LinkDB
All DBs
Position
1:complement(81865095..81875305)
Genome browser
AA seq
836 aa
AA seq
DB search
MADISAGSRRPDIDHRSRRDTDRGGRSHADRRERSDTDRRGRSDIDFSGRPDADHRGRSD
VDFSGRPDADFPGRIDGLDSLSLNHDVRSHSQHDSFTSRPKIIHRGQFNPYPKNYNQISS
FKAHNYGNKTIKKNWNNKSYSDQNKFDGRPSKYNVPSKKKFSQRNSSHGSHGNFKNSLCI
VDRSISGWYLVLVTNAEEFDEVLKKIELQISPLMFYPYDKRFSENTLKFLIDNYKVAVAL
YNTSYKITLRDDRKLIIKVIPYSPKRRISSLIPVSSEVKEKIIEAVATRYNPRTKSLDLS
KFHAYSIFTDNELFVPLNRPAVLLATLNIAAQHTKHNLNHLNLARNNIYLGDGLVWIRRL
FPELKVLILADNKFTELNKLKSLFGYTIEVLTLSKNPVCETMDKNCYTRNVQKLFPMLIK
LDELNLPSLTNADSKLKMPTNLGNSYPIQQFSSNLVQSNPVMTLVELFLAKYYEQYDNKV
SRQMISEAYHDNATYSLSSCLLKSCMHGSLANYIPESRNLLISDQNQSINCLIHKGKENI
INILEKLPKTKHDFGSFIIDVPFASSTIIQVVVNGVFAEEFNENHNHQVFRSFCRTFSLV
PAKNSWIILSDMMFITLVSSELMEESTKRFYVFKPSMTNYPSNSNSFKTAMLIGDKLPDV
LSTLCSKTAIPNCLSSEYQQDSLSSKQFSPLSQTIDTQSTSTFQTSVVQHLQSSHQQRHC
PGLPLTTPIVSMLSNSQPLTSLCPMSSTKLSFPVPNTKPIEPALSTASTKIHLDSSNNHN
ENSKNELLMIKRFSNESGMNDKWSKRCLVENNWDYGKATLSFSKLKSVIPSIAFKH
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatatccgccggaagtcgacggccggacatcgaccaccgcagtcgacgcgat
accgaccgtggaggacgatcccatgccgatcgccgcgaacgatccgacaccgaccgccgc
ggacgatccgatatcgacttctccggacgacccgatgccgaccatcgcggacgatccgat
gtcgacttttccggacgacccgatgccgacttccccggacggattgacggactcgattcg
ttgtctttgaatcacgacgtccgttcacatagtcaacatgacagttttacttcaaggcct
aaaattattcatagaggacaatttaacccatatcctaaaaattacaatcaaataagttca
ttcaaagcgcacaactatggaaataaaactattaaaaagaactggaataataaaagctac
tcggatcaaaataaatttgatggcagaccttcaaaatataatgtaccatccaaaaaaaaa
ttttctcaaaggaattctagtcatggtagtcatggcaatttcaaaaattcattgtgcatt
gtagacagaagtatatctggttggtacttagttcttgtgacaaatgctgaagaatttgat
gaagtattgaaaaaaattgaattacaaatctcaccattaatgttttatccatacgataaa
cgattttctgagaatacattaaaatttcttattgataattataaagttgctgtggcattg
tataatacaagctataagataacactaagagatgatagaaaattaattataaaggtcata
ccatactcacctaaacgaaggatttcatcattaataccagtatccagtgaagtaaaagaa
aaaattatagaagctgtggcgactcgttacaaccctagaaccaagagtttagatttgtca
aaattccatgcttattcaatatttaccgataatgaactgtttgtaccattaaatcgacct
gcagttcttttggcaacactcaatatagctgctcaacacaccaagcataacttgaatcat
ttgaatctagccagaaataacatatatttaggtgatgggcttgtatggatacgtagattg
ttccctgaattgaaagtgttgatattggctgataataaatttactgaattaaataaacta
aagagtctttttggttatactattgaagtgctaacattgtccaaaaatccagtatgcgaa
acaatggacaaaaattgttacacacggaatgtacaaaaattatttcctatgttaatcaag
ttggatgaattaaatttgccttctttgactaatgctgattccaagttgaaaatgccaacc
aacttaggaaatagttacccaatacaacagtttagctctaacttggtacaatcaaatcca
gttatgactttagtagaattgttcctagcaaaatactatgaacagtatgacaacaaagta
tccagacaaatgatatcagaagcttaccacgataatgctacatattcactatctagttgc
ttactaaaatcttgtatgcatggtagtctagcgaattacatacctgaaagtcgaaatttg
ttgatatccgatcaaaaccaaagtattaattgtcttatacacaaaggcaaagaaaacata
ataaacattttagaaaagttgcccaaaacaaaacatgactttggctcattcataattgat
gtaccatttgcaagttctacaataatccaggtagtggtgaatggcgtgtttgccgaagaa
tttaatgaaaaccacaatcatcaagtatttagatcattttgtaggacattcagtttagta
cctgctaaaaatagttggataatattaagtgatatgatgtttataacattagtatcctct
gagttaatggaagaatcaacaaaacggttctatgtttttaaaccatcaatgacaaattat
ccatctaatagcaacagttttaaaactgcaatgcttataggagataaattacctgatgta
ttatcaacattatgttcaaagacagccatacctaactgtctgtcatcagaataccaacaa
gactcactttcatcaaagcagttctctccattgtcacagaccatagatacacagtcaaca
tctacttttcagacatctgtagttcagcacttacaatcatcacatcagcagcggcattgc
cctggattaccattaactacaccaatagtcagtatgctatccaactctcaaccgttgact
tccttatgtcctatgtctagcactaaattatcatttcctgtacccaacacaaaaccaata
gaaccagccctttctacagcatcaactaaaatccatttagattcttctaataatcataat
gaaaattctaaaaatgaattgttaatgattaagaggttttcaaatgagtctggaatgaac
gataaatggtcaaaaaggtgtttagttgaaaataactgggattatggcaaagctacatta
agtttttcaaaactaaaatctgtaattccttcaatagcatttaaacactga
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