Aphis gossypii (cotton aphid): 114128877
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Entry
114128877 CDS
T05869
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114128877
03036 Chromosome and associated proteins [BR:
ags03036
]
114128877
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114128877
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
114128877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
HHH_9
S1
HHH_3
Spt6_S1
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
114128877
NCBI-ProteinID:
XP_027849283
LinkDB
All DBs
Position
3:43077340..43088201
Genome browser
AA seq
1813 aa
AA seq
DB search
MSQFLDSEAEESEDDELDEIDKKKAKKIKAMESDDDDDEDDEDKIREELKDLIDDNPIEE
SDGSGDESDGSKKRKKSDDDFDDRLEEDDYDLIEENLGVKVERRKRFKRLRRLEDEESDD
EGTGENATEDREAIANTLFDMSDNEEERTTDRVSSRAERVDNYDVEGDEEGEGYSDEDDD
GFIVDDEGRPIKEKKKKRKHIYHDAALQEAQDIFGVDFDYDEFEKYDDEYEDDVSDDDYL
EDEEDGERRQRPKPQKRRKATRKSIFEIYEPIELKRGHFTDLDNQIRNNDIPERMQLREV
PVTPVPEGSDELDDEADWIYKQAFCKPTITTQENKGGVDPRLQSKKGPQTIGKIKKALDF
MRNQNFEVPFLAYYRKEYVEPELDINALWRVYHFDAKWCQLKSRKTMLIELLEKMRNYQM
EMLMVDTNAPMPDHIRIIKDEDIDKLRAVQTNEELKDIQGHFMLYYASDVPAMQESARKK
SREMKRKARELREERRKLALEAGEEVPDDDEDAGNLDDEDSNVETVKPASSSGPYTMCLK
SGLAGFAKRFGLKPEHFAANVRDNYQRHEVDQESVDPYKLAGEYCNELLKTPEEVLKAGK
YMVACQISREPLIRKCLRETFFDRAKINIVPTKRGLKEIDENHNCYSMKYIRRKPVRDLV
RDDFLKLQMAEDDKLLTISFDEEVDGLGSLPYIEEVKQLYIRDEFSSNVQQWNDVRRECV
DLAFRKLLMPEMVKELRRSLLAEAKEHILKSCKQKLSNWIAVGPYKPEVDEDDDDWDTSK
GIRVMGLAYSPDHEQASFACILSTDGEVVDHLRLPYIMKRPFNDDVKAKRDGDFNHIRNF
ITFKKPHVIVIGAESRDALWLVRDIKAVVDQLVVDEQFPQIQVEILDNHLARIYANSIKG
ENEFRDYPQLLRESISLGRRMQDPLVEFSQLCTTDDEILCLRYHQYQEVLSQEELLEGLY
QEFINRTNEVGVDINDVVQRVYAPNLLQFVCGLGPRKATALIKLMKQTNQRLENRTQLVT
ACHMGPKIFINCAGFIRIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDE
EANPAGALEEILDAPERLKDLDLDAFAEELERQGFGNKSITLYDIRQELNHRYKDIRVSY
KPPNPAQVFELLTKETQETFFVGKMVLATVTGIARRKPQNDQLDKANPVRNDESGLWQCP
FCFKNDFLELSDVWNHFDAGGCPGQASGIRIRLDNGISGFIAMKNLSNTHVANPEDRVRF
NQAIHCRIIKIEPDRFSFEATSKSSDLKDQEHQWRPQKDPYYDHETESRQRKTELDKNKI
KNAQTYIKRVIVHPCFHNVSFAEAVKLLNNSDQGDAIIRPSSKGADHLTVTWKVADNVYQ
HIDITEKGKVNAFSLGRSLWIGTEEFEDLDEIIARHITPMASNARELLRFRYYRDTDGGN
IEKAEQILRDEKNNNPSKIHYIVSVSQKYAGKFLLSCLPTRRSKHEYITVTPEGYRFRSQ
NFDSIGSLFRWYKEHFRDATPHVTPVASRSAGQSYGPSPHSEPSPMNRSHSSHSNITPQY
SQSPHASYNNMQPSAYNTPYTPSGQTPYIGNYATPRYGSTQAPVHDGVFLHPSSLTPIVQ
SSPKPSSSRQPVQSADPSDWRRMAEEWAKAKQRGDGGYSTPMSDGGGRHTPRSRYNNHRY
SMNRERESSTPRSDAPSPTPSASSYGYHSPAPSKNYKNNYTSSSHNSKSPRGPSSNSGTP
YDPFTMDPGQDSPGVYASSSRSGRNDANDPDLRYASPGSRWTPRSGRSTPHTINSPRSMI
ESSMGDNTPLYED
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtttctagattctgaagcggaggagagtgaagatgatgagttggacgaaatt
gacaagaaaaaagctaagaaaattaaagcaatggaaagtgacgatgacgatgatgaagat
gatgaagacaaaattcgcgaagaactaaaggacttaattgacgataatccaatagaagaa
agtgatggttctggtgatgaatctgatggttcaaaaaagagaaaaaaatcagatgatgac
tttgatgatcgattggaagaagacgattatgatcttattgaagaaaatcttggcgttaaa
gtggaacgaagaaaacgatttaaaagattaagacgtttagaagatgaagaaagtgatgat
gaaggaactggtgaaaatgctactgaagatagagaagctattgctaacactttatttgat
atgtctgacaatgaagaagaaaggacaactgatcgtgtttcttcaagagctgaacgagtt
gataattatgatgtagaaggcgatgaagaaggagaaggatattctgatgaagatgatgat
ggatttattgtagatgatgaagggcggccaattaaagagaaaaagaaaaaacgtaaacat
atatatcatgatgctgcccttcaagaagcacaagacattttcggtgttgattttgactat
gatgagtttgaaaaatatgatgacgagtatgaagatgatgtatctgatgatgactattta
gaagatgaggaagatggtgaaagaagacaacggccaaaacctcaaaaacgtagaaaagct
actagaaaatcaatttttgaaatatatgaaccaattgagttgaaaagaggtcattttacg
gacttagacaatcaaattcgtaataatgatataccagaacgaatgcaactacgtgaagtt
ccagttacaccagttcccgaaggttctgatgaattagatgatgaagcagactggatttac
aaacaagcattttgcaagccaactattactacacaagaaaacaaaggtggtgttgatcct
cgacttcaatccaagaaagggcctcaaacaattggaaaaattaagaaagcattagatttt
atgcgaaatcaaaactttgaagttccatttttagcatactacagaaaagaatatgttgaa
cctgaactcgatatcaatgcgttatggagagtttaccattttgatgctaaatggtgtcaa
ttgaaatctcgcaaaactatgttgattgaattattggaaaaaatgcgaaattatcaaatg
gaaatgttaatggtggatacaaatgctcctatgccagatcatattcgcattattaaagat
gaagatattgataagttgcgtgcagtacaaacaaatgaagaacttaaagatatacaaggt
cattttatgttatactatgccagtgatgtccctgctatgcaagaaagtgctagaaaaaaa
tcaagagaaatgaaaagaaaagctagagaactaagagaagaaagaagaaaacttgcttta
gaagctggtgaagaagttcctgatgatgatgaagatgctggtaatttagacgatgaggat
tcaaacgttgaaacagttaaacctgcaagtagttcaggaccttacacaatgtgcttaaaa
tcaggactcgctgggtttgcaaaacgttttggtttaaaacctgaacattttgcggcaaat
gttcgtgacaactaccaaaggcatgaagtagatcaagaatctgtcgatccctataagctt
gctggtgaatactgcaatgaattattaaaaacccctgaagaagttttgaaggctggcaag
tatatggtagcttgtcaaatatctcgagaaccactcataagaaaatgtttgagagagact
ttctttgatcgtgctaaaataaatattgtaccaaccaaacggggtctcaaagaaattgat
gaaaatcataattgttattcaatgaagtacattcgtcgtaaaccagtaagagatttagta
agagatgactttttaaagttacaaatggctgaagatgataaattactaaccatttcattt
gatgaggaagtagatggtctgggttcccttccttatatagaagaagttaaacagctttat
attagagatgaatttagttcaaatgtacaacaatggaatgatgttaggcgtgaatgtgtt
gatttagcttttagaaaattattgatgcctgaaatggtaaaagaactcagacgttctttg
ctggctgaagctaaagaacatatattaaaatcttgcaaacaaaaattatcaaattggata
gctgtaggtccatataaaccagaagtagatgaagatgatgatgattgggatacaagtaaa
ggcattagagttatgggattagcttattcgcctgatcatgaacaagcatcatttgcatgt
attttatcaactgatggtgaagttgttgatcatttacgtttgccatatattatgaaaaga
ccattcaatgatgatgtaaaagcaaaaagagatggagattttaatcatataagaaacttc
attacttttaaaaaaccccatgtcatagtaattggagcagaatctagagatgcattatgg
ctagttagggatattaaagcagttgttgaccaactagttgttgatgaacaatttcctcag
atacaagttgaaatcttagataatcatctagctagaatttatgccaattctattaaaggc
gaaaatgaattcagagattatccacaacttctacgtgaatcaatttctttaggacgtaga
atgcaagatcctttagttgaattttctcaattatgtacaacagatgatgaaatattatgt
cttcgctatcatcaatatcaagaagttttgagtcaagaagaattactggaaggtttatac
caagaatttattaatcgtactaatgaagtgggtgttgacataaatgatgttgttcagcga
gtttatgcaccaaacttattacaatttgtttgtggtttgggacctcgtaaagctactgca
ttaattaaactaatgaaacaaacaaatcaacgattagaaaatcgaacccaattagttact
gcatgccatatgggccctaagatatttataaattgtgctggatttattagaattgatacc
aactctttgggtgacagtactgaagcatatgtagaagttttagatggatctagagtacat
ccagagacatatgaatgggccagaaaaatggctgtagatgctctagaatatgatgatgag
gaagctaatccagctggagctctagaagaaattttagatgctccagaaagacttaaagat
ttggatttggatgcatttgctgaagaattggaaagacagggctttggtaataaaagtatt
acgctttatgatatacgccaagagttaaatcatcgttataaagatattagagtgtcatat
aagcctccaaatcctgctcaagtttttgaactattaactaaggaaacccaagaaacattt
tttgttggaaaaatggttttagctactgtcactggaatcgcacgtagaaaacctcaaaat
gatcaacttgacaaagcaaatccagtgagaaatgatgaaagtggtttatggcaatgtcca
ttttgttttaagaatgacttccttgaattatcagatgtatggaaccattttgatgctggt
ggttgccctggtcaagcatcaggaattcgtataagattagataatggcattagtggcttt
atagcaatgaagaatttatcgaatactcatgtagccaaccctgaagatcgtgttcgtttt
aaccaggcaatacattgtagaattattaaaattgaaccagatagattctcatttgaagct
acttcgaaaagctcagatttaaaagatcaagaacaccaatggcgaccccaaaaagatcct
tattatgaccatgaaactgaaagcagacaacgcaaaacagaactagacaagaataaaata
aaaaatgctcagacatatattaaacgtgtaattgtacatccgtgtttccacaatgtatca
tttgcagaagctgttaaattattgaataactctgaccaaggagatgctattattagacca
tcaagtaaaggtgctgaccatttgactgttacttggaaagttgctgataatgtttaccaa
cacattgacataacagaaaaaggcaaagtcaatgctttttcattggggcgttctctttgg
ataggtactgaagaatttgaagacctagatgaaataattgctcgtcatattactcctatg
gcaagcaatgctagagaattattacggtttaggtattatcgagatacagatggaggcaat
attgaaaaagctgagcaaattctccgagatgaaaaaaataataatccttcaaaaatccat
tacatagtatctgtctctcagaaatatgcaggaaagtttcttctatcatgtttacctact
cgtagatcaaaacatgaatatataactgttacaccggaaggttatcgtttccgcagtcaa
aattttgattctattggatctttattcagatggtacaaagaacatttccgagatgctaca
cctcatgtaacaccagtagcgtctcgttctgctggacaaagttatggtccttctccgcat
tcagaaccttcaccgatgaatcgtagtcatagtagccattcaaatattacaccccaatat
tcgcaatccccacatgcatcatacaacaacatgcaaccatctgcatataacactccgtac
acaccatctgggcaaactccttatattggcaattatgctactcctcgttatggttctact
caagcaccagttcatgatggtgtatttctacatcctagctctctcacgccaattgttcaa
agcagtccaaaaccatcttcttctagacaacctgtacaatcagcagatccaagtgattgg
cgtcgaatggctgaagaatgggccaaagctaaacaacgaggtgatggaggatactctaca
cccatgtcagatggagggggacgacacacacctcgtagcaggtataataatcatcgatac
agtatgaatagagaaagagaatctagtacacctcgcagtgatgctccgtcaccaacccca
agtgcctcgtcgtacggatatcattcgccagcaccatcaaagaactacaaaaataattat
acatcttcttcacataactcaaaatcacctcgaggtccatcgtctaattctggtacacca
tatgatccttttacaatggatcccgggcaagactcgcctggagtatatgcatcatcatct
cgttcaggacgtaatgatgcaaatgatccagacttgaggtatgcatcacctggttcaagg
tggactccacggtctggtagatcaactcctcataccattaatagccctagatcaatgatt
gaatcttctatgggcgataatacacctctgtatgaagactaa
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integrated database retrieval system
