KEGG   Aphis gossypii (cotton aphid): 114128924
Entry
114128924         CDS       T05869                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03030  DNA replication
ags03410  Base excision repair
ags03420  Nucleotide excision repair
ags03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114128924
   03410 Base excision repair
    114128924
   03420 Nucleotide excision repair
    114128924
   03430 Mismatch repair
    114128924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ags03032]
    114128924
   03036 Chromosome and associated proteins [BR:ags03036]
    114128924
   03400 DNA repair and recombination proteins [BR:ags03400]
    114128924
DNA replication proteins [BR:ags03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    114128924
  DNA Replication Termination Factors
   ELG1-RFC complex
    114128924
Chromosome and associated proteins [BR:ags03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    114128924
DNA repair and recombination proteins [BR:ags03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     114128924
  Check point factors
   HRAD17(Rad24)-RFC complex
    114128924
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Gp44_lid AAA_16 AAA_11 Rad17 RuvB_N AAA_30 AAA_19 AAA_24 AAA_assoc_2 AAA_22 Mg_chelatase AAA_7 DNAX_ATPase_lid ResIII DUF815 AAA_5 SLFN-g3_helicase bpMoxR nSTAND3 Beta-prop_FAM234A_B
Other DBs
NCBI-GeneID: 114128924
NCBI-ProteinID: XP_027849334
LinkDB
Position
1:complement(19727676..19729373)
AA seq 359 aa
MDSFLKTGKINQDQQSTSSGQKSKDGSRGISDSTTPWVEKYRPRTVDEVSEQSEIVAVLK
QCLEQGADMPHLLFYGPPGTGKTSTIIAAARQLFGDMYKSRMLELNASDDRGIQVIRDKV
KTFAQLTASDRRPDGKPCPPFKIVVLDEADSMTAAAQAALRRTIERETKTTRFCLICNYV
SCIIDPLTSRCSKFRFKPLSHDIMLARLEHICKEENVKCAPRVLARLVDASGGDMRRAIT
SLQSTARLKGEDGIEESDVLEVVGTVPDVWLDRMIDIGRTYDYQKMDGFVEDLIFDSYSA
AQVLEQLHDKIVFSTDLLDKQKALICKTISICAYRLQEGCSEYVTLLHLLCSVAKALKG
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggattcttttctaaaaactggaaaaatcaaccaagatcaacaatctaccagcagtggt
caaaaaagtaaagatggatcgcgaggaatttctgatagtaccacaccttgggtggaaaaa
tatcgacctcgtacagttgatgaagtatctgaacagtcggagattgtagctgtactaaaa
caatgtttagaacaaggtgctgatatgcctcacttattattttatggtccacctggtact
ggtaaaactagtaccataattgcagctgcacgccagttgtttggagatatgtacaaaagc
cgtatgttagaacttaatgcatctgatgaccgtggtattcaagtgattcgagataaagtt
aaaacatttgcacagcttacagcttctgatcgacgaccagatggtaaaccttgtccacca
tttaaaattgttgtattagacgaagctgactcaatgacagcagctgctcaggcagccctt
agacgtaccattgaacgagagacaaagactactagattctgccttatttgtaactatgta
agttgcattattgacccattaacatcccgttgctctaaattcagatttaaacctttatca
catgacataatgctagctcgtcttgagcacatatgtaaagaagaaaatgttaagtgtgca
ccacgggtgttagcacggttggttgatgcttctggtggagatatgcgtagagcaattaca
tcacttcaaagtacagctagattaaaaggagaagatggtattgaagaatcagatgttcta
gaagttgttggcactgtccctgatgtttggttagatcgtatgatagatataggtcgtaca
tatgactatcaaaaaatggatggttttgtggaagatttaatatttgattcctattcagca
gctcaagttttagaacaattgcatgataaaatagtgttttctacagatttattggataaa
caaaaggcactaatttgcaaaactattagtatttgtgcctatagactacaagaaggctgt
agtgaatatgtcactcttttacatctgttatgttcagttgctaaagcattaaaaggctaa

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