Aphis gossypii (cotton aphid): 114129295
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Entry
114129295 CDS
T05869
Name
(RefSeq) uncharacterized protein LOC114129295 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114129295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114129295
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114129295
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114129295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114129295
NCBI-ProteinID:
XP_027849783
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Position
X:complement(44915188..44919057)
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AA seq
536 aa
AA seq
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MVVPGARGFGASTSPTAHRLLMRHTATTVSERPARSTTNITPSDALPRARKAAEDGARNT
VRPTLAGRNVKPRTEASGGQFLRSGTHQMVRSKKKSSSNQSSNNMDPSQFNDSWKIVKHV
SGNVADTKMQNRKKMSNVVTQNTANNNSQAHNSMENTMIQHSNWKDHSQMPDLLKQWDFS
LILGELYNDIVNGQNSADSLFMPDFNLSPPFNFQSKFNCDNEMPPDLSQSNFPLIDGQIL
SNNGPRNDFNGKYANAVSAEKSYVKVLKSNAEPSAFKMRKKDFPALPGTQIQMPNVANKQ
STMTDSNSERVTANIEPKLFNNLKKNNSRPSCRSLSDTDFHVNGTTVPLSNHVNISIANG
MVSDIPGSMLRDQFGIIGHLVSMRAVEYDRKFSTLTYGHDLTSLGMNLNSPENIYTTFAG
PFESAPLGPHNIDFDVPPEYRVQDKIKDKLAPINLSKYEEDLLFYLFYTHFGEVMQLSVS
DELRIRGWRYHTGYRVWFIPESESIKLDKNGTNKHGIFYVFDPQLWRKVPRELNLG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtcccaggggcccggggattcggagcttctacctcaccaacggcccatcgcctg
ttgatgcgtcacacggcgacgacggtatccgagcgcccggctcggtcgacgacgaacatt
actccgtcggacgcactgccgcgcgcacgtaaagccgccgaagacggagctcgtaatact
gtcagaccgactttggccggccgaaacgtcaaaccgcgaacagaagcaagtggaggtcaa
tttttaagatcaggcacacaccaaatggttagatcaaaaaagaagtcgtcatccaatcaa
tcatcaaacaacatggatccatcacagttcaatgattcctggaaaattgtgaaacatgta
agcggaaatgtagcagacacaaaaatgcaaaaccgtaaaaaaatgtctaatgttgtaaca
cagaatacggcaaataataatagtcaagctcataattcaatggaaaatactatgatacag
cactctaattggaaagaccatagccagatgccagaccttctgaaacaatgggatttctca
ttaatattgggtgaattatacaatgacattgttaatggtcaaaattcagcagatagtttg
tttatgcctgactttaatttgtcaccaccattcaattttcaatcaaaatttaattgcgat
aatgaaatgcctcccgatttaagtcaatctaactttcctctcatcgatggacaaatttta
tctaacaatggaccaagaaatgattttaatggcaaatatgctaacgctgtgtctgcagag
aaatcttatgtaaaagtgttaaaatcaaatgcagaacctagtgcatttaaaatgagaaaa
aaggattttccagcattgcctggtactcaaatacaaatgcctaatgttgctaataaacag
tctactatgacagattccaattcagagcgggtcacagcaaatattgaacctaaattgttt
aataatcttaagaaaaataattcaaggccttcttgcagaagtttgtcagatacagacttc
catgtgaatggtactactgtaccactttcaaatcacgttaacatatcaattgcaaatggt
atggtttctgacatacctggcagtatgttacgtgatcaatttggaataattggtcatctg
gtttctatgagagctgtagagtatgatcgtaaattttcgacattaacttatggacatgat
ttaacatctcttggtatgaacttgaattcccctgaaaacatttacacaacatttgcaggt
ccatttgaaagtgctcctctgggaccacataacattgactttgatgtaccaccagaatat
agagttcaagataaaatcaaggataagttggctccaattaacttgtccaagtacgaggag
gatttattgttctatcttttttatactcattttggagaagtaatgcagttgtctgtttct
gatgaattgcgtattagaggttggcgctaccatacaggataccgtgtatggttcattcct
gagtctgaatctatcaagttagataaaaatggtacaaataaacatggcatattttatgtg
tttgatccacagttgtggcgtaaagttccaagagaattaaatcttggttag
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