Aphis gossypii (cotton aphid): 114129808
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Entry
114129808 CDS
T05869
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03015
mRNA surveillance pathway
ags03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114129808
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114129808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114129808
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
114129808
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Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
114129808
NCBI-ProteinID:
XP_027850450
LinkDB
All DBs
Position
3:43294702..43305029
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AA seq
672 aa
AA seq
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MTKMADGVDIDLYADDLEQDFAQEDFAGNDNVDLYDDVISGTNDSAQTRQPVDRPPSANN
QNSTPLVTNGSSTNSSANNSTTGRRYQLYIGNLTWWTTDQDITDSVTSIGVSDFIEVKFF
ENRGNGQSKGFCVVTLGSEHSLRMVMDRLPKKELHGQSPVVTFPTKQALLQFESQSKTRP
LPPPNNQNMPSMGGMSRTPGQVMQQPMRGGPMMPQQPMMQQQGMRNRMPMQGMQQPPQGM
QPPMGMTNGHRMPLQSGGPMGPHQQGPPPPGYQNQWNGINQQMGPPRPGMQPQGPVGQPR
GPPPGMFPPGQGPPRMGPPQGPQGPPGPGGPRGDWNRPPGMAPHQMAPPGSGFPPHQQGP
PMQGPPPGQGPVQMMPGGPGQAPAPHVNPAFFQQPSGAPQGPPGHPGYGPPNGPSSRPYM
NNDMGMSEQELEEIMSRNRTVSSSAIARAVADAAAGEFSNAIETLVTAISLIKQSKVASD
ERCKILVSSLHDTLHGIESKSYSSRRERSRSPRDRLHRRSRRERTRSRERDYRDRSRERD
RDRERDRDKCVNRYVDRYYTSERDGDRDRDRERDREYRERSREDSSVKASGRNRKITPPD
VTESVPVSSKSRYYDDRYRERERDRDRERDREREREREPTSSRRAVDADRDIERDRDRRE
DRAESSHRSSRH
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatggccgacggcgtggacatcgatctgtacgccgacgatttggaacaagac
ttcgcccaggaggattttgctggaaatgataatgtagatttgtatgatgatgtcatatct
ggaacaaacgatagtgctcagacaagacaaccagtagatagacctcccagtgcgaataac
caaaatagcacaccattagtcacaaatggttcatctactaatagctccgctaataattct
actacaggacgccgataccaactatatattggtaatttaacatggtggacgactgatcaa
gatataacagatagtgttacgagcataggtgtctcagatttcattgaagttaaatttttt
gaaaatcgaggaaatggccaatcgaagggattttgtgttgttacattgggctctgagcat
agtttacggatggttatggatagattgccaaaaaaagagctacatggacaatcacctgtt
gtcacttttccaactaaacaagcccttttacagtttgaatcgcaatccaaaactcgacca
ttgcctccaccaaacaatcagaatatgccttctatgggtggtatgtctagaacacctggt
caagttatgcagcaacctatgcgtggtggtcctatgatgccacaacaacccatgatgcaa
cagcaaggaatgagaaatagaatgccaatgcaaggtatgcaacaacctcctcaaggtatg
cagccaccgatgggaatgactaatggacatagaatgccattgcaatcaggaggtcctatg
ggtccccatcaacaaggtccacctccccctggttaccaaaaccagtggaatggaattaac
caacaaatgggacctccaagaccagggatgcaacctcaaggaccagtgggtcagcctaga
ggaccacctccaggaatgtttccaccaggccaaggtccaccacgaatggggccaccacaa
ggtcctcagggtccaccaggacctggaggtccacgtggtgattggaatcgtcctcctgga
atggcacctcatcaaatggctccaccgggttctggtttccctccacatcaacaaggtccg
ccaatgcaaggtcctccacctggccaaggaccagttcaaatgatgccaggtggtccgggt
caagcaccagctccacatgtaaatccggcattcttccaacagcccagtggtgcacctcag
ggacctccaggtcatccaggatatggtcctcctaatggaccttcttctcgaccttatatg
aataatgatatgggaatgtctgaacaagaattggaagaaattatgagtagaaatagaact
gtttctagttctgctattgctcgagctgtagccgatgctgcagctggtgaattctcaaat
gctattgaaacgttggttacagcaatatcattaataaaacaatctaaggttgctagtgat
gaacgctgtaaaatattagtgagttctctgcacgatacattacatggaatcgaaagcaag
agttatagttcaagaagagagaggtctagatcacctcgtgatagattgcatagaagatcg
aggcgtgagcgcactagatctcgtgaacgtgactatagagacagaagtcgtgaacgtgat
cgtgatagggaaagagatcgtgacaaatgtgttaacaggtacgttgaccgttattataca
tcagaacgagacggtgacagggatagggatagagaaagggatcgcgaatacagagagaga
agtcgagaagacagttctgtaaaagcaagcggccgaaataggaaaatcactccgcccgac
gtaaccgagtctgttcctgtatcctctaaatccaggtattatgatgatcgttatagagaa
cgtgaacgcgatagagatagagaacgtgatagggaacgtgaacgagaacgtgaaccgaca
tctagtaggagggcagtagatgcagacagagatattgaacgtgatcgtgatcgtagggaa
gaccgagctgaatcttcacatcgtagttctagacattaa
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