Aphis gossypii (cotton aphid): 114130096
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Entry
114130096 CDS
T05869
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114130096
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ags01009
]
114130096
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ags04131
]
114130096
03029 Mitochondrial biogenesis [BR:
ags03029
]
114130096
Protein phosphatases and associated proteins [BR:
ags01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114130096
Membrane trafficking [BR:
ags04131
]
Autophagy
Autophagosome formation proteins
ULK complex
114130096
Mitochondrial biogenesis [BR:
ags03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114130096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
TBK1_ULD
DUF1643
Motif
Other DBs
NCBI-GeneID:
114130096
NCBI-ProteinID:
XP_027850787
LinkDB
All DBs
Position
X:complement(27169186..27199029)
Genome browser
AA seq
1039 aa
AA seq
DB search
MENLLVYHVDIGRWITCDFSMLNKTVSELKLQIEKKTDIPVNKQVLLVSGGGHLDPFKAV
SCYCAGTDTSPFFLFSKRLIDHPEPPSAYFDTRPDIDFTREHQRTQGMPPTIEALNVRVS
LAQQYSENAQYNLNCIDILINDQHMMHQGWSAAVANMLDTVEKFKYKADIFENDFKQYLN
GREDSINLLNNFNDILLEISKIPLLPALLENNSEERARMDSSTNDVKNVVHQSLLEWVTA
RQGLTNLEHIVEHCENSLKQFNEEMLNAVLQEVSAMNECSSRSDCSEIKGLEHRLFKLAQ
MMDESKRLATEQYNLADTIKMNHAKAANEGDVSVISVLLASHDKQLEMMNKNNLRLCDIR
NRSILAKQELCNNLHPRLKWLIVIENKVSDVEAIMLLYSDSIKLTREYLDVVEQLHNTPT
LYFNAVAEVVRRRIFSQALLIWSSDLACHMMARHSDEIAKRKNFQSQFEGHFLSPLFPGL
EDMPPAFATQAPPIFDYNLPKLCLEDLDILIKQLPQIARVTSVPNFNAITQFFLSKSIQE
DGTLAIESNNDHKSVAMETSNLMLGDMNTIEEKLNEVMTAVGLGSCKIDMQLESDVIKRT
HSEMENDSYNPDSFVLPHKYNGSHQEHTVKLLRKSLYTLENVANISINKLRSDLNLFKQF
ILQQNLEINMFTTDLQSKYNIQTSYLQQLIQCVEESKRELDHMRIRINELESLVEMHIKN
EEHERQLRIRMENERDEWMQQGLEDARKEITNQLTMSHKKELEMMHARFKLVTQAANMER
SSSEQSLEKNKRYDVIELVNHEAMMAQLKEDLLLEKEQAIQEERKQCEQKLAQERQVKCD
EKRDDQVICLWGESKKNTDDKNKSFKYLKEKSSNDLRLSTYVPKPRSNSIAVPEWDIDSS
SASSSVFVELSKSSSSESDEGKLSISSCNAGDYVLVIWDSMYRNYRVYQENKRNLVFLHP
DSIDNLLLKIGSDETPKLQHFSAEVVQKEYCQAVKEDNRYKVKKGLKFYRVKIQMLKGPN
HRREISTSDSSSVSVTYVQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccttttagtttatcatgttgacatcggaagatggattacatgtgactttagc
atgctcaataaaacagtatctgaattaaagttacaaattgaaaaaaagactgacattcca
gtgaacaagcaagttttgctagtcagcggtggagggcatctagacccattcaaggctgtt
tcatgttattgtgccggcaccgatacaagtccattttttttgtttagtaaaagacttatt
gatcatcctgaaccaccttctgcttattttgacactcgaccagacatagactttactaga
gaacaccaaaggactcaaggaatgccacctacaatagaagcattaaatgttagagtttct
ctagcacaacaatatagtgaaaatgctcaatataatttaaattgtatagatatccttatc
aatgaccaacatatgatgcatcaaggttggtcagcagctgtagcaaatatgcttgataca
gtagagaaatttaaatataaagctgatatatttgaaaatgattttaaacaatatctcaat
ggacgagaagacagtattaatttacttaacaattttaatgatattttgttagaaatatca
aaaattcctttgctaccagctcttttagaaaataattctgaagaacgagcacgaatggat
agttcaacaaatgatgtaaaaaatgtagttcatcagtcattacttgaatgggtaacagcc
cgacaaggattaacaaatttggaacatatagttgaacattgtgaaaatagtttaaaacag
tttaacgaagaaatgttaaacgcagtcttacaagaagtatcagccatgaatgaatgctct
agtcgaagtgattgttctgaaatcaaagggctggaacatagattatttaaacttgcccaa
atgatggatgaaagtaaacgattagcaacagaacaatataatcttgctgatactataaaa
atgaatcatgcaaaagctgctaatgaaggtgatgtatcagttataagtgtgttgttagca
tctcacgataagcaattagaaatgatgaataaaaacaatttaaggttatgtgatattcga
aatagaagtattttagcaaagcaagaactttgcaataatctacacccacgacttaagtgg
ttaattgttatagaaaataaagttagtgatgttgaagctattatgttgttatatagcgac
agcataaaattgactcgtgaatatttggatgttgttgaacagttacataatacaccaaca
ctttattttaatgcagttgctgaagttgttagaagacgcatattttctcaagcattacta
atttggtcaagtgatcttgcctgtcatatgatggcacgtcattcagatgaaatcgctaaa
cgtaaaaatttccaatctcaatttgaaggtcacttcttaagcccattattccctggactt
gaagatatgccaccagcatttgcaacacaagcacctccaatatttgattataacttacca
aaactttgtttagaagatttagatattttaattaaacaattgcctcaaatagcccgtgta
acatcagtacccaattttaatgcaataactcagttctttttatcaaaatcaatacaagaa
gatggcacacttgctattgaatctaataatgatcataagtctgtagctatggaaacaagt
aatctaatgttaggagatatgaatacaatagaagaaaaacttaatgaagtaatgacagca
gttggtcttggatcttgtaagattgatatgcagctagaatcagatgtcattaaaagaaca
cattcagagatggaaaacgacagctataatccagatagttttgtattaccacacaagtat
aatggaagccatcaagaacatacagtaaaattattgaggaaaagtctatacacattggaa
aatgtagctaatatttcaattaataaattgcgatcagatttaaatttatttaaacaattt
atacttcaacaaaatttagaaattaatatgtttactactgatttacaatcaaaatataac
attcagacttcttatttgcaacagcttattcaatgtgttgaagaaagtaaacgtgagtta
gatcatatgagaataagaataaatgagttggaatctcttgtagaaatgcacataaaaaat
gaagaacatgaacgtcagttacgtataagaatggagaatgaaagagatgagtggatgcaa
caaggattagaggatgctcgtaaagaaataacaaatcaattaacaatgtcacataaaaaa
gagttagaaatgatgcatgcccgttttaaattagtcactcaagcagcaaatatggaacgt
agttcaagtgaacaaagcttagaaaaaaacaagagatatgatgttattgaacttgttaat
catgaagcaatgatggcccagcttaaagaagacttgttattggaaaaagagcaagctata
caggaagaacgaaaacagtgtgaacaaaaattagctcaagaacgacaagtgaaatgtgat
gaaaaaagggatgatcaagtaatttgcctttggggcgaaagcaagaaaaatacagatgat
aaaaacaaatctttcaaatatttaaaggaaaaaagttcaaatgatcttaggttaagtact
tatgttccaaaaccaagatcaaatagcattgctgtaccagaatgggacatagattctagt
tcagcatcaagcagtgtttttgtggaattgagtaagagttcaagttctgagtctgatgaa
ggaaaactttctatcagttcttgcaatgctggagactatgttttggttatatgggactct
atgtacagaaattatagagtatatcaagaaaataaaagaaatttggtatttttgcatcct
gacagcatagacaacttattactaaaaatcggctctgatgaaacaccaaaattacaacat
ttttcagcagaagttgtacaaaaagaatactgtcaagcagttaaggaggataatagatat
aaagttaaaaaaggattgaaattttatcgagtaaaaatacagatgctcaagggaccaaat
catcgacgagaaatatcaacttctgatagttcatctgtctcagtgacttatgttcaataa
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