Aphis gossypii (cotton aphid): 114130111
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Entry
114130111 CDS
T05869
Name
(RefSeq) DNA excision repair protein ERCC-8-like isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03420
Nucleotide excision repair
ags04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114130111
09124 Replication and repair
03420 Nucleotide excision repair
114130111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ags04121
]
114130111
03400 DNA repair and recombination proteins [BR:
ags03400
]
114130111
Ubiquitin system [BR:
ags04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114130111
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
114130111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
114130111
NCBI-ProteinID:
XP_027850804
LinkDB
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Position
X:complement(27162261..27166482)
Genome browser
AA seq
406 aa
AA seq
DB search
MQQAQPASLKKRKQYSIMDLRIKYSIGAISSMEYKRRAILNELNYMSYSSGRFSLPTMYP
TNINDRIRPTRLILDTILGMEVDPREGKRLLVLSKYHNVTLFNVSEVQFFHHIKRVPIPL
DPKSNTISPNSVHWLWDGSVFSVCHFDSVHFWDSNTCKIIETVKLRTKVLNHIIAAKKNS
THKYVAVSGATGHVFIIDMLHGIVVMTMNNIEKSAIRTIQWHPTNEKQYVTGNDSGNIFL
WDIRYQMKYVLKFQRDNSGLISSLDKAALGLRFYNCGNNIISVDYKGSIKTWDVNTGKLR
PNHYASVSLSDLNTSHLHKHYQFDVTDNLKEDIAFFPSTRGMRIFDIESGEHLPSSNDVG
LSLSCANYDPKNLCLYGSSNESIKSWKPQKCENNIHFEYPSQFDVY
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggcacagcccgccagtctcaagaagagaaaacaatattctattatggatcta
aggataaaatactccattggagctatatcttccatggaatataaacgtcgtgcaattctt
aatgagttaaattatatgtcgtattcatcgggtagattttctttgcctacaatgtaccct
actaacataaatgatcggattcgtcctacacgattgatactagatactattctaggtatg
gaagttgatcctagagaaggtaaacgtttactagtcttgtccaaataccataatgttaca
ttgtttaatgtatccgaagttcaattctttcatcacataaagcgtgtgcctattccactt
gatccaaaaagtaatacaatatcgccaaattcagtacattggctttgggatggttcagta
ttttctgtttgccattttgattctgtgcatttttgggactcaaatacttgtaaaataatt
gaaactgtgaaattgcgtactaaagttttgaaccatattatagctgcaaaaaaaaatagt
actcacaaatatgttgcagtgtcaggagctactggacatgtgtttataattgatatgctg
catggtattgttgtaatgactatgaataatattgaaaaatcggcaataagaactatccag
tggcatccaacaaatgaaaaacaatatgttactggcaatgacagtgggaatattttccta
tgggatattcgttatcaaatgaaatatgttttaaaattccaaagggataattctggtctt
atatcaagtcttgataaagcagctcttgggttacgtttttataattgcggaaataatatt
atatctgttgactacaaaggaagcatcaaaacttgggatgttaatactggtaaactgcgt
cctaaccattatgcatctgtgtcattgagtgatctaaacacttctcatcttcataaacac
tatcagtttgatgttactgacaatttaaaagaagatattgcattttttccatcaacaaga
ggaatgagaatatttgacattgaaagtggtgaacatttaccttcttctaatgatgtaggt
ctatctttaagctgtgctaattatgatcctaaaaatttgtgtctttatggatcttctaat
gaatcgataaaatcctggaaacctcaaaaatgtgaaaacaatatacattttgaataccct
agccaatttgatgtatattaa
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