Aphis gossypii (cotton aphid): 114130176
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Entry
114130176 CDS
T05869
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114130176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114130176
03036 Chromosome and associated proteins [BR:
ags03036
]
114130176
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114130176
Coactivators
SAGA/TFTC/STAGA complex
114130176
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114130176
STAGA complex
114130176
TFTC complex
114130176
SAGA complex
114130176
SLIK complex
114130176
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
DSE1_N
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_WDR41
NBCH_WD40
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
PAC11
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_NOL10_N
ASA1
WD_LRWD1
PEP5_VPS11_N
Beta-prop_SPT8
Tricorn_2nd
LisH_PAC1
WDR54
Motif
Other DBs
NCBI-GeneID:
114130176
NCBI-ProteinID:
XP_027850882
LinkDB
All DBs
Position
1
Genome browser
AA seq
671 aa
AA seq
DB search
MEEDIKPDIKPVIDETPKEPDDKKTSLCVALKILKKYNLNSTAETLKKEANLTDSAYNTS
EHDVNNALNIFKSQGDPSVYENAYITLSKFVETSLDIYKHELSCVLYPVFVHMYLDLVCN
RYEAEALRFMNKFGPIQESYYQADIKNLAIITKKEELDDNALISNYKSNEFVVRMSRDTL
SLLKRHLKEKKQTVLLDIVQENLFFDVYEGIARNKQQIDAVAGGMIGEGTRQDNKSRVYY
GLLKEXDLQTAAATVNLDEDEEETQESEKPKKKKSKSNPLLSKKTKIDPNAPPLDRMPLP
QLREIDKKIKVQAVLDSAKRVALNHETLPSICCYTLLNCSNAVNCATISDDATMLAVGMA
NSRVRVWSLVPQKLRAMKTADQLLDIDLESDDVMHRILDDRSAETTRTLLGHYGPVYQVS
FSPDKTLLLSCSEDCTIRLWSLLLWSCVVAYKGSYHPVFDVKFSLHGYYFATASRDRTAR
LWATDNYQTLRLFAGHFSDVDCCQFHPNSNYIATGSSDRTVRLWDCVTGEQVRLMTGHKG
EILTLCFSNEGRVLASAGNDCNVLLWDIAHGHLIAMLTGHNGPIYTITFSRDSTILATGS
HDCKIMLWDYSKLLEDLSLDDMNVHNPTVVNNSSKYLLRAFGTKNSPVIHLFFSRRNIMF
CVCSFNSPQSN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatattaagccagatattaaaccagtgatcgacgaaactcccaaagaacca
gatgataaaaagactagtttatgtgttgcattgaaaattctcaaaaagtataacttaaat
tctactgctgaaacattgaagaaagaagcaaatttgacagattctgcatataatacttca
gaacatgatgttaataacgctctaaatatatttaaatctcaaggagatccgtcagtgtat
gagaatgcttatataactctatcaaaatttgttgaaacatcactagatatttacaaacac
gagttgagctgtgttttgtatccagtatttgtacacatgtatttggatcttgtttgtaat
cgttatgaagctgaagctttaaggtttatgaataagtttggacctatacaagaatcctac
tatcaggctgacattaaaaacttggcaataattaccaaaaaagaagaattagatgataat
gcattaataagtaattacaaatcaaatgaatttgttgttcgaatgtctagggatacatta
tctcttttaaaacggcatctgaaagaaaaaaaacaaactgtcttactagatatcgttcaa
gaaaatttgttctttgatgtatatgaaggaatagctagaaacaaacaacaaattgatgcg
gtagcaggaggtatgattggagaaggaactcgacaagataataaatccagagtgtattat
gggttattgaaagaanccgatttgcaaactgcagccgcaacagttaacttagatgaagat
gaagaagaaactcaagagagcgaaaaaccaaaaaaaaagaaatcaaagtctaatccttta
ttatctaaaaaaactaaaattgatcctaatgctccaccattagatagaatgccactacca
caattaagagagattgataaaaaaattaaagttcaagcagttttagattctgctaagcga
gtggcattaaatcatgaaacattaccttcaatatgttgttatacattattaaattgttcc
aatgctgtaaattgtgcaacaattagtgatgatgcaacaatgttggctgtaggaatggct
aatagtcgagtacgcgtgtggagcctagtacctcaaaaactacgtgctatgaaaacagct
gatcaacttctagatattgatttagaatcagacgatgtaatgcataggatattagatgat
agatcagcagaaaccactcgtactttactcggacattatggccctgtatatcaagtatcc
tttagtcctgataaaacattattattgtcatgttcagaagattgcactattagactttgg
agtttactattatggtcatgtgtagttgcatataagggaagttaccatcctgtatttgat
gtcaagttcagtttacatggttattattttgcaactgctagtagagaccgcacagcaaga
ttatgggcaacagataattatcagacattaaggttgttcgctggtcatttttcagatgtt
gattgttgtcagtttcaccctaattcaaattatattgcaactggatcaagtgaccgaact
gtgcgtttatgggattgtgttaccggagaacaagtacgattgatgactggccataaagga
gaaattttgactttatgcttttcaaatgaaggacgagttttagcatcagctggcaatgat
tgtaatgtacttctatgggacattgcacatggacatttaatagctatgctaactggacat
aacggacctatttatacaattacttttagtagagatagtactattttagcaactggctct
catgattgtaaaataatgctttgggattattcaaaacttttagaagatctttcattggat
gatatgaatgtacataacccaacagttgtgaataatagttctaaatacttacttcgagca
tttggtaccaagaattcaccagttatacatctatttttttcgaggcgtaatattatgttt
tgtgtatgctcatttaattctcctcaatccaactaa
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