Aphis gossypii (cotton aphid): 114130176
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Entry
114130176 CDS
T05869
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114130176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114130176
03036 Chromosome and associated proteins [BR:
ags03036
]
114130176
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114130176
Coactivators
SAGA/TFTC/STAGA complex
114130176
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114130176
STAGA complex
114130176
TFTC complex
114130176
SAGA complex
114130176
SLIK complex
114130176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
WD_LRWD1
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WDR54
DUF7226
Motif
Other DBs
NCBI-GeneID:
114130176
NCBI-ProteinID:
XP_027850882
LinkDB
All DBs
Position
1:complement(44822348..44825556)
Genome browser
AA seq
671 aa
AA seq
DB search
MEEDIKPDIKPVIDETPKEPDDKKTSLCVALKILKKYNLNSTAETLKKEANLTDSAYNTS
EHDVNNALNIFKSQGDPSVYENAYITLSKFVETSLDIYKHELSCVLYPVFVHMYLDLVCN
RYEAEALRFMNKFGPIQESYYQADIKNLAIITKKEELDDNALISNYKSNEFVVRMSRDTL
SLLKRHLKEKKQTVLLDIVQENLFFDVYEGIARNKQQIDAVAGGMIGEGTRQDNKSRVYY
GLLKEXDLQTAAATVNLDEDEEETQESEKPKKKKSKSNPLLSKKTKIDPNAPPLDRMPLP
QLREIDKKIKVQAVLDSAKRVALNHETLPSICCYTLLNCSNAVNCATISDDATMLAVGMA
NSRVRVWSLVPQKLRAMKTADQLLDIDLESDDVMHRILDDRSAETTRTLLGHYGPVYQVS
FSPDKTLLLSCSEDCTIRLWSLLLWSCVVAYKGSYHPVFDVKFSLHGYYFATASRDRTAR
LWATDNYQTLRLFAGHFSDVDCCQFHPNSNYIATGSSDRTVRLWDCVTGEQVRLMTGHKG
EILTLCFSNEGRVLASAGNDCNVLLWDIAHGHLIAMLTGHNGPIYTITFSRDSTILATGS
HDCKIMLWDYSKLLEDLSLDDMNVHNPTVVNNSSKYLLRAFGTKNSPVIHLFFSRRNIMF
CVCSFNSPQSN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatattaagccagatattaaaccagtgatcgacgaaactcccaaagaacca
gatgataaaaagactagtttatgtgttgcattgaaaattctcaaaaagtataacttaaat
tctactgctgaaacattgaagaaagaagcaaatttgacagattctgcatataatacttca
gaacatgatgttaataacgctctaaatatatttaaatctcaaggagatccgtcagtgtat
gagaatgcttatataactctatcaaaatttgttgaaacatcactagatatttacaaacac
gagttgagctgtgttttgtatccagtatttgtacacatgtatttggatcttgtttgtaat
cgttatgaagctgaagctttaaggtttatgaataagtttggacctatacaagaatcctac
tatcaggctgacattaaaaacttggcaataattaccaaaaaagaagaattagatgataat
gcattaataagtaattacaaatcaaatgaatttgttgttcgaatgtctagggatacatta
tctcttttaaaacggcatctgaaagaaaaaaaacaaactgtcttactagatatcgttcaa
gaaaatttgttctttgatgtatatgaaggaatagctagaaacaaacaacaaattgatgcg
gtagcaggaggtatgattggagaaggaactcgacaagataataaatccagagtgtattat
gggttattgaaagaanccgatttgcaaactgcagccgcaacagttaacttagatgaagat
gaagaagaaactcaagagagcgaaaaaccaaaaaaaaagaaatcaaagtctaatccttta
ttatctaaaaaaactaaaattgatcctaatgctccaccattagatagaatgccactacca
caattaagagagattgataaaaaaattaaagttcaagcagttttagattctgctaagcga
gtggcattaaatcatgaaacattaccttcaatatgttgttatacattattaaattgttcc
aatgctgtaaattgtgcaacaattagtgatgatgcaacaatgttggctgtaggaatggct
aatagtcgagtacgcgtgtggagcctagtacctcaaaaactacgtgctatgaaaacagct
gatcaacttctagatattgatttagaatcagacgatgtaatgcataggatattagatgat
agatcagcagaaaccactcgtactttactcggacattatggccctgtatatcaagtatcc
tttagtcctgataaaacattattattgtcatgttcagaagattgcactattagactttgg
agtttactattatggtcatgtgtagttgcatataagggaagttaccatcctgtatttgat
gtcaagttcagtttacatggttattattttgcaactgctagtagagaccgcacagcaaga
ttatgggcaacagataattatcagacattaaggttgttcgctggtcatttttcagatgtt
gattgttgtcagtttcaccctaattcaaattatattgcaactggatcaagtgaccgaact
gtgcgtttatgggattgtgttaccggagaacaagtacgattgatgactggccataaagga
gaaattttgactttatgcttttcaaatgaaggacgagttttagcatcagctggcaatgat
tgtaatgtacttctatgggacattgcacatggacatttaatagctatgctaactggacat
aacggacctatttatacaattacttttagtagagatagtactattttagcaactggctct
catgattgtaaaataatgctttgggattattcaaaacttttagaagatctttcattggat
gatatgaatgtacataacccaacagttgtgaataatagttctaaatacttacttcgagca
tttggtaccaagaattcaccagttatacatctatttttttcgaggcgtaatattatgttt
tgtgtatgctcatttaattctcctcaatccaactaa
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