Aphis gossypii (cotton aphid): 114130347
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Entry
114130347 CDS
T05869
Name
(RefSeq) uncharacterized protein LOC114130347 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114130347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ags03000
]
114130347
03021 Transcription machinery [BR:
ags03021
]
114130347
03036 Chromosome and associated proteins [BR:
ags03036
]
114130347
Transcription factors [BR:
ags03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
114130347
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114130347
Chromosome and associated proteins [BR:
ags03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114130347
PBAF complex
114130347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF1993
Motif
Other DBs
NCBI-GeneID:
114130347
NCBI-ProteinID:
XP_027851107
LinkDB
All DBs
Position
2:complement(36788954..36802943)
Genome browser
AA seq
1161 aa
AA seq
DB search
MALPSTYKQIAINQQSPARAPVTFNILKATKTGSYQNERLRPGGSSNQLSGSKDQNQSPF
IPNSHGNPAFHPQKISKAAADARGIKPPKPPEKPLMPYMRYSRKVWDQVKASNPDLKLWE
IGKIIGQMWRDLPEDNKQEYIDDYESEKLTYEKAMKLYHTSPAYLAYLQAKNKGKLNQVE
DREPHERSTGGGKQAAADRRIEIQPAEDEEDQDDGFSVKHIAYARYIRNHRLINEIFSDS
VVPDVRSVVTTARMQVLKRQVQSLTMHQKKLEAELQQIEEKFDTKKRKFIECSDTFQQEL
KKHCVQAVSEEAFQKMVERQVEILQKERTKTVCPPGPPEEFSKVNCEQQLEQNGAVPSIE
EDTSSCVVPSSTTDDSSNMEVESGVTSDSSSKSEQLVITETRENGEIATSPPQSSHQSQP
QLLKEQQLPQIQSQQPQFQVQSQFQQQLSQTQPLQPQPSQQSLQPPQQQLLQPQPSLQQL
PQAQPILQQLPQGQPTLHQLPQTQPEIQQLLQPQNSFQQIPQQPASTALQQQPEQVSPQP
HPQQHSPQPQLQPLNHHQQQPLQSNVVQQQSLQPSTPQQQPLQQSTPQQSPLQPHPPQQQ
PLQSNLPQQQSLQPHAAQQQLLPSHAPQQQPLQPHAPQQQPLQPLASQQQPLQPLAPQQQ
PLHPHTPQQQPLQPLVPQQQPSQPHVPQQQPLQPSPPQQQSLQPNPPQQQPLQPNPPQQQ
PLQPNPPQQQPLQPNPPQQQPLQPNPPQQQPLQPNPPQQQSLQPHATQQQILQSHAPQQQ
PLQPHPSQQHSLLPPASQQHTLQPQLQQQPQTPQQQSPVQQSSIQTPPQQQSSQPQLQTP
QTQPLPSPQVPQLQSPLPQQLPTPQAQMQPQSLPAQPQLQPTQSQSQPPQSQLQPPQSQL
QPPQSQTQQPQSQSQAQPPSVMVPPPPTIPPALGSDSPSNVVSSTTESPPKVPESKAYSA
PSTQPYPSLSQSYAQVPPFQLSQNSQVNVPSVYPPNQVPTNTAPPQHPHSGMMQPPQIPP
SQGAPSSTPSTGFPPYPQQQPYSSQAMPPRPYTYPPQPYPQYTPHPYYHQAPYQQYPPPP
PRVAYPQQIGTVNQDTNQPPLENMYNTPSISGPSEKSNDENKQLIDEVKSTEINTAHEKP
AEQEETVPPQSSAAKVDEITQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttccttcaacatacaaacaaatagctataaatcaacagtctcctgctcgtgct
ccagtcacattcaacattttgaaagcgactaaaacgggatcctatcaaaatgaacgttta
agacctggtgggagttccaatcaattatctggatcaaaagatcaaaatcaaagtccattc
ataccaaatagccatggaaatccagcatttcatccacaaaaaatatcaaaagctgctgct
gatgcccgtggtattaaacctcccaaaccccctgagaaacctcttatgccatatatgcga
tacagtcgtaaagtttgggatcaggtaaaggcaagtaatcctgatttaaagttatgggaa
ataggtaaaatcataggacaaatgtggagggatcttccagaagataataaacaagagtat
attgatgattatgaatcagaaaagttgacttatgaaaaagctatgaagttataccatact
tcaccagcttacttagcctatttacaagcaaagaataaaggtaaattgaatcaagtagaa
gatagagaaccacatgaaagatcaacaggaggtggtaaacaagcagctgctgatcgtaga
attgaaatacaaccagctgaagatgaagaagatcaagatgatggattcagtgtgaagcac
atagcttatgctaggtatataagaaatcatagattgattaatgaaattttttctgatagt
gttgttcccgatgtacggtcagtggttactactgctcgtatgcaagttttaaagagacaa
gttcaaagtttaaccatgcatcagaaaaaattagaggcagaattacaacaaattgaagaa
aaatttgatactaaaaaaagaaaatttattgaatgtagtgacacatttcaacaagaatta
aaaaagcactgtgtacaagcagtatcagaggaagcatttcaaaaaatggtagaacgccaa
gtggagatattgcaaaaagaacggactaaaactgtgtgcccaccagggcctcctgaagaa
ttttctaaagtaaattgtgagcagcaattagaacaaaatggagctgtaccatcaattgaa
gaagacacttcatcgtgtgtagttccttctagtaccactgatgatagttcaaatatggaa
gttgagtctggtgtaacttctgacagctcatcaaaatctgaacagcttgtaataacagaa
actagagaaaatggagaaattgcaacttctccaccacaatcttctcatcaatctcaacct
caattattaaaagagcaacagctaccacaaattcaatcacaacaacctcaattccaagtc
caatcgcagtttcaacaacaattatcacaaacacaacctttgcagccccagccttctcaa
caatctttacaacctcctcaacaacaactgttacagccacagccttcattacaacaattg
cctcaagcacagccaatattacagcaattacctcaaggacagcctacattacatcaattg
ccacagacacaacctgaaatacaacaactattgcagccacagaattcttttcagcagata
ccacagcaaccagcatctacagcattacaacaacaaccagaacaagtctctccacagcca
caccctcaacaacactctcctcaaccacaattgcagccactaaatcatcaccagcaacaa
cctttacagtcaaatgtagtgcaacaacagtctttacaaccatctactccacagcaacag
cctttacaacaatctactccacagcagtcgcctttacagccacatcctccgcaacaacag
cctttgcagtctaaccttcctcaacaacaatctttacagccacatgctgcacagcaacag
cttttaccatcacatgctccacaacaacagcctttacagccacatgctcctcaacaacag
ccattacagccacttgcctcacaacaacagccgttacagccacttgccccacaacaacaa
cctctacaccctcataccccacaacaacagcctctacagccacttgtcccacaacaacag
ccttcacaaccacatgtcccacaacaacaacctttacagccatcccctcctcaacaacag
tcattgcagccaaaccctcctcaacaacaaccattacagccaaaccctcctcaacaacaa
ccattacagccaaaccctcctcaacaacaaccattacagccaaaccctcctcaacaacaa
ccattacagccaaaccctcctcaacaacaaccattacagccaaatcctcctcaacaacaa
tctttgcagccacatgctacacagcaacagattttacaatcacatgctccacaacaacag
cctttacaaccgcatccctcccaacaacattctttactgccacctgcttcccaacaacat
actttacagcctcaacttcaacagcagccacaaactccacaacaacagtctcctgtacaa
caatcatcaattcaaacacctccacaacaacagtcttcacagcctcaattacaaactcca
caaacacaaccattaccttccccacaggtaccacaactgcaatcaccacttccacaacaa
ttaccaactccacaggcacaaatgcagccacaatcacttccagcacagcctcaattgcag
ccaacgcaatctcaatcacaaccaccacagtcccaattacaaccaccacagtcacaattg
caaccaccacagtctcaaactcaacagcctcagtctcaaagtcaagcacaacccccttca
gtcatggtgccgccaccacctactattcctccagcactgggatcagattccccttcaaat
gttgtttcatcaactacagaatcaccaccaaaagtaccagaatctaaagcttattctgct
ccttcaactcagccatacccatcattatcacagtcttacgctcaagtacctccatttcaa
ctgtcacaaaactctcaagttaatgttccaagtgtatatccaccaaatcaagttccaaca
aatactgctcctccacaacatccacattcgggtatgatgcaacctcctcagattcctcct
tctcaaggagcaccatcatcaaccccatcaactgggtttcctccgtatccacaacagcaa
ccttattcttctcaagcaatgccacccaggccttacacatatcctccacaaccatatcct
caatatacacctcatccatattatcatcaagctccttatcaacagtatccgccaccacct
ccacgtgttgcatatccacaacaaataggtactgttaatcaagatacaaatcaaccacca
cttgaaaatatgtataacacgccttcaatttctggaccatctgaaaaatcaaatgatgaa
aacaagcaattaattgatgaagttaaatctactgaaataaatacagctcatgagaaacca
gctgaacaagaagaaacagttccacctcaatcatctgcagcaaaagttgacgaaattaca
caataa
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integrated database retrieval system
