Aphis gossypii (cotton aphid): 114130372
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Entry
114130372 CDS
T05869
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XV) chain
KO
K06823
collagen type XVIII alpha
Organism
ags
Aphis gossypii (cotton aphid)
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ags04147
]
114130372
00535 Proteoglycans [BR:
ags00535
]
114130372
00536 Glycosaminoglycan binding proteins [BR:
ags00536
]
114130372
Exosome [BR:
ags04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114130372
Proteoglycans [BR:
ags00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
114130372
Glycosaminoglycan binding proteins [BR:
ags00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114130372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
114130372
NCBI-ProteinID:
XP_050054474
LinkDB
All DBs
Position
1:complement(21549797..21795251)
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AA seq
1043 aa
AA seq
DB search
MTWTFIVVCATLCRFSAAVDELADEKFVPDEHDLQTAIKVPFEDPQLYFDSGEDGFPAFG
IKPGSDIKSPYRLFLPEKLYSEFSIVVNFKLNSMDGGFLFAVVNPLENVVQLGLQVVPSS
SNAMNVSFLYTDVNKYSSSSNVLATFSVPWKIRKYIRLSLKVTREYVRLFGRCLEPQTVM
VVRDPVELLFDSASTLYIGQAGPLIKGPFDGAIQEMKIYSSPDFADIQCTELLQPDDDKE
PENPEDLTNGGYSDRPPAPPPPPPSNENHGYQTPNIKGDKGDAGQKGESIRGPPGPPGPP
GSPFSGDFATDEELVKSGVSGPRGPPGICSCNLTTLFAPGKIPELIQGPPGNPGTDGKMG
MTGLPGAVGLPGERGLEGIKGDKGERGDVGPRGNEGIQGPKGDSGIDGERGLQGPPGPPG
PPGGSDFSNNDPSWKPRPIYKDIGFESNVGRPGPPGPKGDPGVDGAPGLKGAKGIQGNKG
VRGEMGSKGIKGDKGHAGSIGPQGFKGERGIRGFDGTPGVPGENARPAPKGEKGDSGPPG
PPGPPGLTQTGVKIDKTDTAVVKTVKGDKGTKGDHGEKGAVGNLGPGGNPGPPGLTGPKG
ERGEPGLPAPLISTTDLGMIKGDKGEMGRRGRRGKPGPTGPPGPPGDIGLPGLRGTPGKA
GGQKGEKGDRGESVKGDKGEPGKDGLPGSGGTYVPVPGPAGPPGPPGIPGVAIEGQKGEP
GDPGFSSAPLRSEINEHIIVPGALTFPNKKSMINVTDRTQMGTIAFIIEEEALLVRVTRG
WQYISLGSLITTGIDPAPTSVPMPTRVPLESSNLVHNHPVKDNTMWHPKMLRIAALNEPY
TGNMHGVQSVDYSCYRQSQRAGLHGAFKAFLSSRLNNLKTIXHESDRDLPVVNIKGDVLF
NSWKDIFSENGAFISQQPRIYSFSGKNVLTDFTWPQKTIWHGSDISGDSAVDGNCDAWNS
ESADKRGLGSSLMQNADRQAKLLDQDSAYDCRNFFIVLCVEITPHSGAMFSRKRRSGVGG
LHDEPQLPMSRQEYEKFIENIRA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggacgtttatcgttgtctgtgcaacgctgtgcaggttcagtgcagccgtcgat
gaattagcagatgaaaaatttgtgccagacgaacatgatcttcaaaccgccattaaagtt
ccttttgaggacccgcagttgtactttgatagcggggaggatggttttccagcctttggc
attaaaccaggatctgatataaaatcaccgtatcgattattcctgcctgagaaattgtac
tctgaattttccatcgtggttaatttcaaactcaattctatggatggtggttttctattt
gctgttgtcaatcctttagaaaacgtggtgcagctgggcttgcaggtcgtaccatcgtcg
tccaacgcgatgaatgtgagtttcctgtatacggacgtgaacaaatactcatcgtcgtcg
aacgtcttagccacgttttcagttccttggaaaattcggaaatacatccgactgagtttg
aaggtgaccagagagtacgtgcggttgttcggtaggtgtttggaaccacagaccgtgatg
gtagtcagggatccggtggaattgttgttcgactcagcgtctacgttatacattggccag
gcagggccgctgatcaaaggaccgttcgacggggccatacaagaaatgaaaatctattca
tcgccagatttcgccgatatccagtgcactgagcttttgcagccagacgatgacaaggaa
ccagaaaatcctgaagacctgactaacggcggttactcggatagaccacctgcccctcca
ccaccgccgccatcaaacgaaaaccatggctatcagacacccaacatcaaaggggataaa
ggcgatgctggtcaaaagggagagtcgatcagaggaccacccggaccacctggacctccg
ggatcgccgttttccggggactttgccaccgatgaagaactcgtcaagtccggagtatct
ggaccaaggggtccgccaggcatatgcagttgtaacctcaccacgttatttgcacccggc
aaaataccagaattaatacaaggaccaccgggcaatccaggaactgatggaaaaatggga
atgacaggactcccgggtgccgtagggttgccaggagaacgaggactagaaggcataaaa
ggggataaaggtgaaaggggagatgtcggtccacgaggaaacgaaggcattcaaggcccc
aaaggtgattctggaattgatggagagcgcggtttacaaggaccaccgggtccacccggt
cctcctggtggatcagacttttcaaacaatgatcctagctggaaaccaagacctatttac
aaggacatcgggtttgagtcaaatgttgggaggcctggtcccccgggtcctaaaggcgat
ccgggtgttgatggcgctccgggcttaaaaggtgcaaaaggaattcaaggcaataaagga
gttcgtggtgagatgggaagcaaaggaatcaaaggcgataagggccatgctggatctatt
ggaccacaaggttttaaaggagaacgaggaatacgtggttttgacggaaccccaggagtg
ccaggagaaaatgctcgtccagcacccaaaggcgaaaaaggcgatagtggaccacccgga
ccgcccggtccacctggactaacgcaaactggagtaaaaattgataaaacggatacagca
gttgtgaaaacagtcaaaggtgataaaggcacaaaaggtgatcatggggaaaagggagcc
gttggtaatctgggcccaggaggaaaccctggtccacctggtttgacaggtcccaaaggt
gaacgaggagaacccggtttaccagcacccttaatatctacgaccgatctaggaatgatc
aaaggagataaaggtgaaatgggaagacgaggcagacgcggaaaaccaggtcctacaggt
ccacctggcccacctggagatattggtttgcctggtttaagaggcacaccgggtaaagca
ggaggtcaaaaaggggaaaaaggagatcggggagaatctgttaaaggcgataaaggggaa
ccaggaaaagacgggttaccaggttcgggtggaacatacgtgcctgtaccaggaccagca
ggcccaccaggcccaccaggtattcctggtgttgcaatcgaagggcaaaaaggtgaacct
ggtgatccaggtttttcttcagcacctctcagaagtgaaataaatgaacatattattgta
cctggcgctcttacattcccgaacaagaaatcaatgataaacgtaacagatagaactcag
atgggtaccattgcattcatcatcgaagaagaagctcttttagtacgtgtcacgcgtggc
tggcagtacatttcccttggttcattgattacaactggaatcgatccggctccaacaagc
gttccaatgccaacaagagtgccattagaatcatcgaatttagtacataaccatccagta
aaagataacacaatgtggcatcctaaaatgttaagaatagcagcgttgaacgaaccatat
acaggtaatatgcacggcgttcagagcgtggactattcgtgttatcgtcagtctcagaga
gcgggacttcacggagcattcaaagcgttcctgtcttcgaggcttaataatttgaaaacg
atcngtcacgagtccgatagagatttgcccgtagtcaacatcaaaggagatgtgctattc
aactcttggaaagatattttcagtgaaaacggagcgtttatatcacaacagcccaggata
tacagttttagtggaaagaatgtgctcaccgatttcacgtggcctcagaagaccatctgg
catggatcagatatttctggcgacagtgccgttgacggaaattgcgatgcgtggaactcg
gagagcgccgacaaacgaggactgggctcgtcgttgatgcaaaatgccgatcggcaggca
aaactcctggatcaggattctgcttacgattgccgcaacttttttatcgtcctttgcgtg
gaaataacacctcactcgggtgcgatgttttcaaggaaacggcgcagcggcgtcggaggt
ctgcacgacgaaccgcaactaccgatgagccgtcaagagtacgagaaattcatcgagaac
atccgagcttaa
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integrated database retrieval system
