Aphis gossypii (cotton aphid): 114130596
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Entry
114130596 CDS
T05869
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114130596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114130596
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114130596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fez1
CSN4_RPN5_eIF3a
Motif
Other DBs
NCBI-GeneID:
114130596
NCBI-ProteinID:
XP_027851398
LinkDB
All DBs
Position
2:complement(44154882..44170980)
Genome browser
AA seq
2050 aa
AA seq
DB search
MMVNVASLVNSILADDGYNGLSDDTKSKFEQYLRNPTTNRNEIGTNTSSEIRNLPEIDFD
LLNNSTSIREAKFLELQKEIDTVNEQFKNTLKQKHDLMLHNDSLLKNLHEAEIKERMTKM
DDGLLQLKINALNESLLKCTNKFSNLHSKYHKEIKELKPDLDEKKAEVLMLKNDVNLLQI
KSKNQEDTINIMKREIEEINHIHINEVEQIKKELTNNECLLNHYKDCYENELEQTKKLTI
DILENRDYVSTLTSSLDDLEKRFSTLSNDHQQYKVTSEHTIRVLRNKLDASEEIVKQLFP
VNPDNPNYLIKKGTTITDVYAIYKETCLNLQDTTLELEHCKRNFNILEEQIRNAAPEVDK
MEKDLIESNEKVKQLCDTISRLELKLKDVNTQLELSNSKCDQLSKENEKLHGIEEDLSKQ
VCFLLRNNQCHTRFENRNVGKDMSPQSIISNNYVTFENIQGLQKQNKKLLEVLRSLSKAN
DEQDIKLIKDLKDEIHVLKDKLETQTQLINQQKEKITQLQSSELKPKLTVQLNNEEQNKI
QSPTKTTLDNADESLIIEENIEYYSLVRELNVSNITIKKLKEKLESNSVARTRLDQHVQE
LNLQINELLEKIKTSNIKHSENAENIDNLNGKILSLETENQEMKIEIDKIKSQSNILKKD
NDSMYISNMNYSRELRQKTELQKEFEKTLTSQLDSLIINWNLTLAYIAETDYDKVKFKEE
YKKLTKTLKDVRDTLLLKLEAIDDLSTFKEISRSRTNSFSLCTDERSNFQSVVNKLEHEV
KNLKSKLNESDQLKNQLKSELNVTKQLYKSLEENLKKMSEYSSQLENEREMKKKEYLEKD
QQLSHAVQELSEFNLSQKDNINKLQNQLLEYEMKHSKILEELESAKDHSDELLKNISKQN
NTILTLEEELKKSINDKDRLEKGLNHKLAHYKYKLERFDALELFNTTKSAEIDHLKNQKA
AMEKSIEEIKEMHNLQLKKLDDEINSLKDTIKRWQFENELLSEQFKTTTFELINQERLNN
SKVSDKDDSFNNTSLSTNSVDKQFLKMANLINILKDEKNSIILEFNETIAECNKLKSDLH
YKSKVIDDMQTQMKELRQLHTSGSVMNNDHSKILEKIELCNQIEEKSKILEEKNLLLTNQ
LKELQELDAKKTAEICALKDDMSGMQSEIDQKTSEVLSVTKNLSRWKERSNGTHSDAEFK
QLLNTLEREKGKMATALDQLKSMKSDKSCLEELLKKLETDHSEELNIAKQEILKLKTKIV
STNKAMETFKNIIKSYRQKLSDVASEIYKVKVLARRYKHQSEELNNALSTERSSWQTKFD
ELQQGGSKISLDLEERKKLIEQAKQEQKAEFESIINEHKAKVLEAEAGLNAARSEVKDTK
AKSEDKEMRAKQLLQHVRSRIQNLTRELDTTKKQRDGLIARLDQAESGGRMQEFQVQMSR
IEAENRKLIAEKEQITAEKDRLSHDIQMLNHRVTALMRQFSNQQVKPSTSTGPDKLAVEP
PTANIKPLGPAVNKPQTVHQSVTVNPWRSAAAETPLASIKPMTMQPRSVVVLPTSQTSST
SSQSSMSGTSSSTTITVHPQQPQSVDISSSGGNALDSSEANSTAQSRHLTSSTLVQHVEG
SESMPTVSDSNETTAATPPSILPLQQLIGNAATPSVTAAQASPAISIALVVPQGREQVQT
TVSQPTTVSVSTVSPSQSQLDRYSVQNENGQAMESSNSNIASSSAPGPSTESEPSVVTAC
TSGPSCSSLDTTTHSNSTQRKRKADLLVTSYMKRSKSFMPREENRREMEYEAPTSSQRDS
EVSNSYIGPESNPQDNNKEVEASTDMEVTSEATHENNEVDLTSQECTADTNNMNETNDIQ
NEETEQITGENTPEHSSNAEATAMAVIEEDSPEIIHFQEFQNTPVSSASCEETKTTDNVS
SDAESRENESDSTPIEPQAGPSSALDTVGVSQSTETAETDTLDLEQETVEILSSENEEET
VEIKSIHDIEEPQHDDSPDQEQEQEIISVTSSPSKDNEAVREESPVAGPSGVTSDSSANE
RKPITWNESP
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaacgtagctagtctagtgaactctattttggcagatgatggctataacgga
ctgtccgatgataccaaaagcaagtttgagcagtatttacgcaaccctactacaaaccgc
aatgaaatcgggacaaatacttcatctgaaattagaaatctgccagaaatcgattttgat
ttgctcaataacagtactagtattcgagaagccaagtttttggaattacaaaaagaaatt
gatacagttaatgaacaattcaaaaatacattgaaacaaaaacatgatttgatgttacac
aatgattcactattaaaaaatttacatgaagctgaaattaaggaaagaatgactaaaatg
gatgatggattattacaactaaaaattaatgccttaaatgaaagtttattaaaatgcaca
aataaattctcaaatcttcattcaaagtatcataaagaaataaaagaattgaaaccagat
ttagatgaaaaaaaagcagaggttttgatgttaaagaatgatgttaatttattacaaata
aaatctaaaaatcaagaagatactataaatataatgaaacgtgagattgaagagataaac
catatacatataaatgaagtggaacaaattaaaaaagaattaacaaataatgaatgttta
ttgaatcattataaggattgttatgaaaatgaactagaacaaacaaaaaaactaacaatt
gatatattagagaatagagactatgttagtacattgacatcatctttagatgatcttgaa
aaaagattctcaacactttcaaatgatcatcaacaatacaaagttacctcggagcataca
atacgtgtattaagaaacaagttagatgcttcagaagaaatagttaaacaattatttcct
gttaatccagacaatccaaattatttaataaagaagggaacaacaataactgatgtttat
gctatttataaggagacatgtttaaatttacaagatacaacactagaacttgaacactgc
aagagaaacttcaatattttagaagaacaaattagaaatgctgcacctgaagttgataaa
atggaaaaagatttaattgaatcaaatgaaaaagttaaacaattatgtgatactatttca
agattagagttgaagttgaaggatgttaatactcaattagaattgtctaattctaaatgt
gatcagttatcaaaagaaaatgaaaaacttcatggtattgaagaagatttgagcaaacaa
gtatgtttcttattgcgaaataaccaatgtcatacacgttttgaaaatcgtaatgttggg
aaggatatgagtccccaatcaattatttccaataattatgttacatttgaaaatatacaa
ggcttgcaaaaacaaaacaaaaaattacttgaagtccttcgttctttatccaaagcaaat
gacgaacaagatataaaattaataaaagatttaaaggatgaaattcatgttttaaaagat
aaattagaaacacagacacaattgatcaaccaacaaaaggaaaaaataacacaattacaa
tcttcagaattaaaacccaaattaactgtacagctaaataatgaggaacaaaacaaaatt
caaagtcctactaaaacaacattagataatgctgatgaatctttaataatagaggaaaat
atagaatattattctttagttcgtgaacttaatgtttctaatattacaattaaaaaactt
aaagaaaaacttgaatctaatagtgttgctcgtacaagattggaccaacatgtacaagag
ttaaatcttcaaataaatgaattactagaaaaaataaaaacctctaatattaaacattct
gaaaatgcagaaaacatagataacttgaatggcaaaatattatctttagaaacagaaaat
caagaaatgaaaattgaaatagacaaaataaaaagtcaaagtaatattttaaaaaaagat
aacgatagtatgtatatttccaacatgaattattctcgtgaattgagacaaaaaacagag
ttacaaaaagaatttgagaaaaccttaacctctcaattagattcactaataataaattgg
aatttaacattagcatacattgctgaaactgactatgataaagttaaattcaaagaggaa
tataaaaaattgacaaaaacattaaaggatgttagagataccttacttctaaaattggaa
gccatagatgacttaagtacattcaaagaaatatctcgatctagaacaaattcatttagt
ttatgtacagatgaacgatctaacttccagagtgttgttaataagcttgagcatgaagta
aaaaatctaaaatctaaactaaatgaaagtgaccaattgaaaaatcagttaaaatctgaa
ttaaatgttaccaaacaactttacaaatctttagaggaaaatttaaaaaaaatgagtgaa
tattcttcacagttagaaaatgagcgtgaaatgaaaaagaaagaatacttagaaaaagat
caacaattaagtcatgctgtgcaagaattaagcgagtttaacttatctcaaaaagataac
atcaataaattgcaaaatcaattgttagaatatgagatgaaacatagtaaaattttagaa
gaattagaatctgcaaaagaccatagtgatgaactattgaaaaatatttcaaaacaaaat
aataccatattgacacttgaagaagaattgaaaaagtctattaatgataaagatagattg
gaaaaaggacttaatcataaattagcgcattataaatataaattagaaagatttgatgca
ttagaattatttaatacaactaaatctgcagaaatagatcatttaaaaaatcaaaaagct
gctatggaaaagtctattgaagaaataaaagaaatgcataatttacaattaaaaaaatta
gacgatgaaataaattctctaaaagatacaattaaacgctggcaatttgaaaatgaacta
ttatcagaacaatttaaaacaaccacttttgagcttattaaccaggaacgattgaataac
agtaaagtatcagataaagatgatagctttaacaacacttctttaagtacaaatagtgtt
gataaacaattcttgaaaatggcaaatttgattaatatcttgaaagatgaaaaaaattca
atcattttagagtttaatgaaacaattgctgaatgcaataaattgaaatctgatttacat
tataaatctaaagttatcgatgacatgcaaacacaaatgaaagaactaagacagttacat
acatccggttcagttatgaataatgatcattcaaaaattctagaaaagatagagctatgt
aatcaaatagaagaaaaaagtaagatcttagaagaaaaaaatttactattaaccaaccaa
cttaaagagttacaagaattagacgcaaaaaaaactgccgaaatttgtgctttaaaagat
gatatgtcaggaatgcaaagtgaaattgatcaaaaaacttctgaggttttatctgtaaca
aagaacttgtcaagatggaaagaacgatcaaatggtacacattctgatgcagagtttaaa
caactgttaaatacattagagcgagaaaaaggaaaaatggctactgcacttgatcaatta
aaatccatgaaatcagataaatcatgtcttgaagaattgttaaaaaaattagaaactgat
cattcagaagaactaaatattgcaaaacaagaaatacttaaattaaaaactaaaatagtt
tctactaataaagctatggagacgtttaaaaatattatcaagtcctacagacaaaagtta
tcagatgtagcatcagaaatatacaaagttaaagtattagctagacgttataaacatcaa
agtgaagagttaaataatgcattaagtacagaaagaagctcatggcagactaaatttgat
gaacttcagcaaggggggagtaaaatatctctagatcttgaagaacgcaaaaaactaata
gaacaagcgaaacaagaacaaaaagctgaatttgaatctatcataaatgaacataaagcc
aaagttctagaagctgaagctggtttaaatgctgcaagatctgaggtaaaagatacaaaa
gctaaaagtgaagataaagaaatgcgtgcgaaacagcttttacaacatgttagaagtagg
attcaaaatcttacaagagaacttgatactactaaaaaacaacgtgatggcttaatagct
cgattagatcaagcagaaagtggtggtcgaatgcaggaatttcaagttcaaatgtcacgt
atagaagcagaaaatcgtaaattaattgcagaaaaagaacagatcaccgcagaaaaagat
cgcttgtctcatgatatacaaatgttaaatcatagagttacagctttaatgagacaattt
tcaaaccaacaggtaaaaccgtctactagtactggccctgacaaacttgctgttgaacct
cctacagctaatattaaacctttagggcctgcagttaataaaccacaaactgtacatcaa
tccgttacagttaacccatggcgatctgcagctgcagaaacaccattggctagtattaag
cccatgacaatgcaacctagaagtgtagtagtattacctactagtcaaacatcgtccaca
tcaagccaaagttcaatgagtggaactagtagtagtacaactattactgttcacccgcag
caaccacagtctgttgatatcagtagtagtggaggtaatgctttagactcttcagaagct
aatagcacagcacaaagccgtcatttaacaagcagtactttagtacaacatgttgaagga
tctgaatcaatgcctactgtttctgattctaatgaaacaactgctgctactcccccttca
atcttaccgctacaacagttaataggaaatgcagcaactccaagcgttactgcagcacaa
gcaagtccagccatcagtatagctttggttgtaccacaaggcagggaacaggtacaaaca
actgtatctcaaccaactacagtgtctgtatcaacagtatctccttcacaaagtcaatta
gacagatacagtgtgcaaaatgaaaatggccaggcaatggaaagtagtaacagtaatatt
gctagttcttcagccccaggtccttcaacagaatcagaaccatctgttgttactgcttgt
actagtggacctagttgttcctctctagacactacaacacactctaacagtactcaaaga
aaacgaaaagctgatcttctcgtgacttcatatatgaaaagatctaaatcttttatgcct
agagaagaaaatcgtagagaaatggaatatgaagcacctacatcctctcagagagattca
gaagttagcaattcttatattggtcctgagagtaatccacaagataataataaagaagtt
gaagcaagtacagatatggaagtaacaagtgaggcaacccatgaaaataatgaggttgac
ttaacaagccaagaatgtactgctgacacaaataatatgaatgaaactaatgatattcaa
aatgaagaaacagagcaaataacgggagaaaatacaccagaacattcatcaaatgccgaa
gccactgctatggctgttattgaagaagattcaccagaaattattcattttcaagaattt
caaaatacacctgtttcttcagcgagttgtgaagagactaagactactgataatgtatca
tcagatgcagaatcaagagagaatgaaagtgattcaactccaattgaacctcaagctgga
ccctcaagtgccttggatacagttggagtttctcaatcaactgaaactgctgaaacagac
acacttgatttagaacaagaaacagttgaaattttatcatctgaaaatgaagaagaaact
gttgagattaaatcgattcacgatattgaagaaccccaacatgatgatagccctgatcaa
gaacaggaacaggaaataatttcagtcacctcttcccctagcaaagataatgaagctgtt
cgcgaggaatctcctgttgctggaccgagtggtgtaactagtgattcatcagcaaatgaa
cgcaagcctataacatggaatgaatcaccatga
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integrated database retrieval system
