Aphis gossypii (cotton aphid): 114131087
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Entry
114131087 CDS
T05869
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114131087
09123 Folding, sorting and degradation
03018 RNA degradation
114131087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114131087
03041 Spliceosome [BR:
ags03041
]
114131087
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114131087
mRNA degradation factors
5'-3' decay
Lsm complex
114131087
Spliceosome [BR:
ags03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114131087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
114131087
NCBI-ProteinID:
XP_027852031
LinkDB
All DBs
Position
3:complement(3777584..3778637)
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AA seq
80 aa
AA seq
DB search
MSRKEALTQFIQQIHGRPVVVKLNSGVDYRGVMACIDGYMNIALEQTEEYINGELKNKFG
DSFIRGNNVLYISTQKRKGV
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaaagaagcattaacacagtttatacaacaaattcatggtcgcccggttgtt
gtgaaattgaatagtggagttgattacagaggtgtaatggcttgcatagatggttacatg
aatattgctctcgaacaaacagaagagtatataaatggagaacttaaaaacaaatttgga
gactcttttattcgtggcaacaatgtactgtatataagtacacaaaaaagaaaaggagta
taa
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