Aphis gossypii (cotton aphid): 114131280
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Entry
114131280 CDS
T05869
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114131280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114131280
03012 Translation factors [BR:
ags03012
]
114131280
Enzymes [BR:
ags01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114131280
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114131280
Translation factors [BR:
ags03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114131280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_19
ResIII
ATPase
nSTAND3
AAA_22
NPHP3_N
AAA_14
T2SSE
AAA_7
AAA_24
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
114131280
NCBI-ProteinID:
XP_027852259
LinkDB
All DBs
Position
X:61773921..61786288
Genome browser
AA seq
1050 aa
AA seq
DB search
MQPMKPFKINKKTGPKDKNKVPRQQSKSNRGDDDDDFFLDNSGPSNMNDEQNSRSFHPPN
LKGRNIDSWHARKQASMIEDKEIIDMTRPKIKPPPGLTGHELDMWHKEYNRLWQKSIKKK
QQKEKGKCFIKLGIEEISRMEMQFQQLEEEMPIIDENIKPSVISNSKLNKKVHSNHKALN
LLTLKDEDVDENAEYIIDRYKKLEDSNFKRKFLDNITGSMEKNLVASIQSNMKLQNDESK
NAYLRNELENKRETVKYRSMCEIRKKLPFYSKKDEILELIHKNQVILISGETGCGKTTQM
AQFILDDAIMSDRGSTCRIVCTQPRRISVISVAERVADERAEHVGEASVGYQIKLEKKLE
REYGSILFCTTGILLQHIQRDSALNCYSHIIIDEIHERDTISDFTLTILKSIIPVRPDIK
VILMSATLNSAVFSKYYNDCPSLNVPGFTYPVEELYLEDIYTLNKFRYFPKKQTQKSRKT
KLGDPFSDFVIPYVNEMRRFNKFPLSLLNWLENPMSEDTDYELILELIYYICNNKDYGAI
LVFLSGWDQISKLTKILKDKGFGNTSRYILIPLHSMLPTVSQKFVFESPPPGVRKIILST
NIAETSVTIDDVVYVINNGRMKLKGFDAENNIGTLNEEWVSLANSRQRRGRAGRVRPGIC
YHLYTRGRERSFSDYVLPEMMRTSLEEVILQAKILQVGMVTPFLEKVMNPPETKTLEVAL
KLLIDLNALDEKENLTPLGFHLAKLPIGPLEGKMIILGAMFSCLSPIMTIAASLNFKDPF
VMPTNKEYQCCEIKKKMDEGHQSDHLMVTRVMSKFLLAKRENKAWEFCKENFLMLNTMNM
LHELKSQYAKYLCDLGFIKTPTYTAFEYNQNSNNIKLLKCVLTAGLCPNIAVSYPEIKTN
GHKFSKFITAEDGKVEIHPKSVNSIDCYYESPLLLYHTKLKTTSIFLHDTTMIYPFPVVL
FAKSLKITGEKTDQVTFSLNPQINFTCSNRIAVFIKQVRKRLKWLIDHLMSHPEEISFNS
NSGSGKALKLVVDLVSAEEHPGIIEFPFRF
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaatgaaaccttttaaaattaataagaaaactggacctaaagataaaaataaa
gtacctagacagcaatctaaaagtaatcgtggtgatgatgatgatgatttctttttggac
aatagtgggccgtcaaatatgaatgatgaacaaaattcaagatcatttcatcctcctaat
ttgaaaggaagaaatattgactcatggcatgctcgtaaacaagcaagtatgatagaggat
aaagaaataattgatatgacaagacctaaaatcaagccacctcctggtttaacaggtcat
gaattagatatgtggcataaagaatataatcgcttatggcaaaaatccataaagaaaaaa
caacaaaaagaaaaaggaaaatgttttattaagttaggaattgaagaaattagtcgtatg
gaaatgcaatttcaacaacttgaagaagaaatgccaattattgatgaaaatattaaaccg
tctgttatatcaaattcaaaactgaataaaaaagttcacagcaatcataaggctttaaat
cttttgacattaaaagatgaagatgtagatgaaaatgctgagtacataattgatagatat
aaaaaactggaagattcaaatttcaaaagaaaatttttagataacattactggatccatg
gaaaaaaatcttgtcgcgtctattcaaagtaatatgaagcttcaaaatgatgaatcaaaa
aatgcatatttgagaaatgaacttgaaaataaacgtgaaactgtcaagtatagatctatg
tgtgaaatcagaaagaaactgcctttttatagcaaaaaagatgaaattttagaactgatt
cataagaatcaagttatactgataagtggcgaaacaggctgtggtaaaactactcaaatg
gcccaattcattcttgatgatgctattatgtctgaccgtggttcaacatgtagaattgtt
tgtactcaaccaagaagaatcagcgttatatcagtggctgaacgtgttgctgatgaaaga
gctgagcatgtaggagaagcaagtgttggttatcaaatcaaactggaaaaaaaactggaa
cgtgaatatggatctatactgttttgtaccactggtattttacttcaacatattcaaaga
gattcagctttaaattgttattcacatattattattgatgaaatacatgaacgtgatacc
attagtgattttactttaactattctcaagagcatcatacctgttagacctgatattaaa
gttatattaatgagtgcaacattaaattctgcagtattttctaagtattataatgattgt
ccatctttgaatgtacctggattcacatatccagttgaagaactatacttagaagatatc
tacacattaaataagtttagatattttcctaaaaaacaaacacaaaaatctcgcaaaaca
aagcttggtgatccatttagtgattttgtaattccttatgtaaatgaaatgaggagattc
aataaatttcctttatcattattaaattggttggaaaatccaatgtctgaagacacagat
tatgaattaattttagaactcatttattacatttgtaataataaagattatggtgcaata
cttgtgtttctttcgggatgggaccaaatatcaaaactgactaaaattttaaaagataaa
ggctttggaaatacatctcgatatatattaattcctttgcattccatgttacctactgta
tctcaaaaatttgtttttgaatcaccacctccgggtgttcgtaagatcatattatccaca
aacatagcagaaacttcagttactatagatgatgtagtttatgtaattaataatggtcgg
atgaagttgaaaggatttgatgcagaaaacaacattggaactcttaatgaagaatgggtg
agcttagctaattctagacaacgtcggggcagagcaggtcgtgtgagacctggtatttgt
tatcatttatatacaagagggcgtgaaagatcatttagtgattatgtattacctgaaatg
atgcggacaagcttagaagaagtaatacttcaagctaaaatattacaagttggtatggta
acaccgttcttggagaaagtaatgaatccaccagaaaccaaaactctcgaagtagcttta
aaactattgatagacttgaatgctttagacgaaaaagaaaatttgactccattaggtttt
catctagcaaaattaccaatcgggccacttgaaggtaaaatgattatcttaggtgcaatg
tttagttgcttgagtccaataatgacaattgctgctagtttaaattttaaagatcctttt
gtcatgccaacaaacaaggaatatcaatgctgtgaaattaaaaaaaaaatggatgaagga
catcaaagtgatcatcttatggtcacaagagttatgagtaaatttttattagcaaaacga
gaaaataaagcatgggagttttgtaaagaaaatttcctaatgttgaatacaatgaacatg
ttgcatgaattaaaatctcaatacgctaaatatttatgtgatcttggatttatcaaaacg
cccacctatacagcttttgagtacaatcagaattcaaataatattaagcttttgaaatgt
gttctaactgctggtttgtgtcccaatattgctgtttcttatcccgagattaaaacaaat
ggtcataaattttctaaatttattactgctgaagatggaaaagtggaaattcatcccaag
tctgtgaattcaattgattgttactatgagagccctttattactataccacacaaaacta
aagaccacttcaatatttttgcatgataccactatgatttatccatttcctgtggtgctg
tttgcaaaaagtctcaaaataactggtgaaaaaactgaccaagttacttttagtcttaac
cctcaaataaatttcacttgttctaatagaatagcagtttttattaagcaagtaagaaaa
agattgaagtggttgattgatcatctaatgtcacatcctgaagaaataagttttaattca
aattcaggcagtgggaaagctcttaaacttgtggttgatcttgtatccgcagaagaacat
cctggtataatagaatttccttttaggttttaa
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