Aphis gossypii (cotton aphid): 114131565
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Entry
114131565 CDS
T05869
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114131565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114131565
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114131565
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
114131565
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Gene cluster
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Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
DUF7552
Motif
Other DBs
NCBI-GeneID:
114131565
NCBI-ProteinID:
XP_027852618
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All DBs
Position
2:54450791..54452912
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AA seq
195 aa
AA seq
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MENKIICVPGQRLCRLDSTHTLGKGTYKRQDYIYSSLAGIVNVDNTNNKISVVEVRSKDK
TIVPAPGDIVTAMVTTLNQDMCKCLITSVCGHELNETYRSSLRRQDVRMKEIDKIDMLQC
FRPGDIILARILPMTEAHTFKLTTAENELGVVIACSEYGHPMTPISWTEMKCTKTSVVEY
RKVAKIVQDTTGENV
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaaaataatttgtgtgcctggacaacggctctgtcgactagattcgacacac
actttaggtaaagggacatataaaagacaagattacatttattccagtttggctggaatc
gtgaatgtagataacacaaataataaaatatctgtagtggaagttcgaagtaaagataag
actattgttccagcacctggagatattgtaacagcaatggtgactacattaaaccaagac
atgtgcaagtgtcttatcacaagtgtctgtggacatgagctaaatgaaacatacagaagt
agccttagaagacaagatgtacgcatgaaagaaattgacaaaattgatatgttacaatgt
tttagaccaggagatataatattagctagaatattgccaatgactgaagctcataccttt
aaactaaccactgctgaaaatgaacttggagtagtcattgcgtgcagtgaatatggccat
ccaatgactcctattagttggactgaaatgaaatgtacaaaaacaagtgtagtagaatac
cgaaaagtagctaaaattgttcaagacaccacaggagaaaatgtttaa
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