KEGG   Aphis gossypii (cotton aphid): 114131565
Entry
114131565         CDS       T05869                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114131565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ags03019]
    114131565
Messenger RNA biogenesis [BR:ags03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     114131565
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     114131565
SSDB
Motif
Pfam: ECR1_N EXOSC1 RRP4_S1 ECR1_N_2 DUF7552
Other DBs
NCBI-GeneID: 114131565
NCBI-ProteinID: XP_027852618
LinkDB
Position
2:54450791..54452912
AA seq 195 aa
MENKIICVPGQRLCRLDSTHTLGKGTYKRQDYIYSSLAGIVNVDNTNNKISVVEVRSKDK
TIVPAPGDIVTAMVTTLNQDMCKCLITSVCGHELNETYRSSLRRQDVRMKEIDKIDMLQC
FRPGDIILARILPMTEAHTFKLTTAENELGVVIACSEYGHPMTPISWTEMKCTKTSVVEY
RKVAKIVQDTTGENV
NT seq 588 nt   +upstreamnt  +downstreamnt
atggagaacaaaataatttgtgtgcctggacaacggctctgtcgactagattcgacacac
actttaggtaaagggacatataaaagacaagattacatttattccagtttggctggaatc
gtgaatgtagataacacaaataataaaatatctgtagtggaagttcgaagtaaagataag
actattgttccagcacctggagatattgtaacagcaatggtgactacattaaaccaagac
atgtgcaagtgtcttatcacaagtgtctgtggacatgagctaaatgaaacatacagaagt
agccttagaagacaagatgtacgcatgaaagaaattgacaaaattgatatgttacaatgt
tttagaccaggagatataatattagctagaatattgccaatgactgaagctcataccttt
aaactaaccactgctgaaaatgaacttggagtagtcattgcgtgcagtgaatatggccat
ccaatgactcctattagttggactgaaatgaaatgtacaaaaacaagtgtagtagaatac
cgaaaagtagctaaaattgttcaagacaccacaggagaaaatgtttaa

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