KEGG   Aphis gossypii (cotton aphid): 114132029
Entry
114132029         CDS       T05869                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ags  Aphis gossypii (cotton aphid)
Pathway
ags03020  RNA polymerase
ags03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ags00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114132029
  09124 Replication and repair
   03420 Nucleotide excision repair
    114132029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ags03021]
    114132029
   03400 DNA repair and recombination proteins [BR:ags03400]
    114132029
Transcription machinery [BR:ags03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     114132029
  RNA polymerase III system
   RNA polymerase III
     114132029
  RNA polymerase I system
   RNA polymerase I
     114132029
DNA repair and recombination proteins [BR:ags03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114132029
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 114132029
NCBI-ProteinID: XP_027853203
LinkDB
Position
1:63312232..63318527
AA seq 210 aa
MDDECESYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPGRSDLIV
LVAHNDDPTDQMFVFFPEEPKIGIKTIKTYCQRMQEETITRAIIVVQQGMTPSAKQSLVD
MAPKYILEQFLESELLINITEHELVPEHIVLTPDEKQELLCRYKLKENQLMRIQVGDPVS
RYFGLKRGQVVKIVRNSETAGRYISYRLVC
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaatgtgaatcgtacaaactgtggcgtattcgaaaaactgttatgcagctt
tgtcatgacagaggatatttagtcacacaagatgaattggatcaaacattagaacagttt
aaagaacaatttggagataaacccagtgaaaaaagacccggacgtagtgatttaatagtc
cttgtggcacataatgatgatcctacagatcaaatgttcgttttctttcctgaagaacca
aaaattggtataaaaactattaaaacttactgccagaggatgcaagaagaaaccattact
cgtgctattattgttgttcaacaaggaatgactccaagtgcaaaacaatctttagttgat
atggcaccgaaatacattttggaacagtttttggaatctgaacttctaattaatataact
gaacatgaattagtacctgaacacattgttttgacaccagatgaaaaacaagaacttttg
tgcagatacaaattaaaagaaaaccagcttatgagaattcaagttggtgatccagtttct
cgttactttggcttaaaaagaggacaagtagtaaaaattgtacgaaattctgaaactgct
ggtcgttatatttcatacagattggtatgctaa

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