Aphis gossypii (cotton aphid): 114132174
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Entry
114132174 CDS
T05869
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114132174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114132174
03019 Messenger RNA biogenesis [BR:
ags03019
]
114132174
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114132174
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114132174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC
zf-CCHC_4
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
114132174
NCBI-ProteinID:
XP_027853365
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All DBs
Position
1:62034560..62038629
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AA seq
280 aa
AA seq
DB search
MELLVAGFDDIKFNVEIALDEQHGALPLPFNGMDKSIAAVCSFYPKGSCSKGALCPMRHV
RGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYARFNACHNKECPFLHIDPESK
LKDCPWYDRGFCRHGPHCKHKHVRRVLCMNYVSGFCPDGPNCKFVHPRFELPAYQQYDAN
LKDSKKLVVICHFCGDTGHKAMYCHKMVSDLVKIKPDGEVNNEPLPTNAQAGFARKLKPL
EEVTCYKCGFKGHYANKCPKGHLAFLSLQQNQALQNNQGA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcttgtggcaggatttgatgacattaagttcaatgttgaaatagctttggac
gaacaacatggggctctacctctgccgttcaatggaatggacaaatctatcgctgcagtt
tgttcattttatccaaaaggctcctgttccaaaggagctttatgtccaatgagacatgta
cgaggtgatcgaactgttgtttgtaaacattggttgcgtggtttgtgcaaaaaaggggat
cagtgtgaattcttacatgaatacgacatgactaaaatgcccgaatgttatttctatgct
cgatttaatgcatgtcataacaaagaatgtccatttttacatattgatcctgaaagtaaa
ttaaaagactgcccatggtatgatcgaggattttgtcgccatggcccacattgtaaacat
aaacatgttcgccgtgtactttgtatgaattatgtttctggattttgtccagatggtcca
aactgtaaatttgttcatcctagattcgaacttccagcatatcaacaatatgatgctaat
ctaaaagattcaaaaaaacttgtagtaatatgtcatttttgtggtgatactggacataaa
gctatgtactgtcataaaatggtatcagatcttgtaaaaattaaaccagatggggaggtc
aataatgagccattgccaacaaatgctcaagcaggatttgctagaaaattgaaaccatta
gaagaagttacatgctataagtgtggatttaaaggtcattatgctaacaagtgtcccaag
gggcatttagcatttttgtctttgcaacagaatcaggcactccaaaacaaccaaggtgca
tga
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