Aphis gossypii (cotton aphid): 114132525
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Entry
114132525 CDS
T05869
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03013
Nucleocytoplasmic transport
ags03015
mRNA surveillance pathway
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114132525
09122 Translation
03013 Nucleocytoplasmic transport
114132525
03015 mRNA surveillance pathway
114132525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114132525
03041 Spliceosome [BR:
ags03041
]
114132525
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114132525
Spliceosome [BR:
ags03041
]
Complex C
Other components
EJC/TREX
114132525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
114132525
NCBI-ProteinID:
XP_027853806
LinkDB
All DBs
Position
2:47914985..47920162
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AA seq
803 aa
AA seq
DB search
MSKRTGRKPKRERTSRRRTRRHSSTSETSVEDVPPPPKVGKTRASSRVDESERKVALTIK
LPKPESNDCSEENTTGMWKVECSNGSDGDIQKLKISLRRSPKDLLREQAAEAKYSAERRE
KEEAASSSTNPSMLDGSVTNYLEQFGSTVAVEESEQNIVDSSEQVQVVIPSNEENIDNDQ
IDSVEVSSEFITSKEEPIVENITINENAVNVTQVEENTIHEEVLEPAAITVESTNPTNSS
EDFSDSTVRPSIDECNVSEPILEENSVNVSEPVLEENSVNVSEVIDTPIALSETIQDIVP
ESIENVVDEPSSSEVLESVSNVDINKIPNNTIIEEVNKSDYINDSEQMEDVVQLTVESPD
LVDDEDPKLIDDEPKPVYEEELNSVDVSKTESVDEIKPIPINEDASKLVDSEETKSIEES
YNVSSSDIPNLKQVDAEKELNEMPKPLSSHPKRKWGSCKTRTPITISPFTLGTIIESNGD
FNADNGEYRSEEGEIQRTDSDEEQDVEEPMELNDTMLIDHEAVDYEAPEEEEKPFIDNDD
NKSDKSLVEEKYEEEPKKKSSVKRITTSSVIRITNLVRPFTVGQLRDLLQRTGKIVSNGF
WMDTIKSQCIVEYENEEQAIETVYALNDSQWPSTNPKFLRVVFTNKDELNKALNGTHPER
LDKQKESKVEKLRTQVDNNFILREWDRGKLEDMNGEKDDKSIKRKISDDDLHVTKDKKFR
KDEKDQHDKRKKSKSKTPERIPTKSLDELFRKTKTTPTLYWSPLSMEQIAEKEDQRRKHL
AEMERSQKTDRRRRDNLHYPKRR
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaagaaccggtcgcaagccgaaacgtgaacgtacgtcaaggcgtcgtactaga
cgtcattcctctacgtctgaaacatcagtagaagatgtgccgccaccccctaaagttggc
aaaactcgagcttctagcagagttgatgagagtgaaagaaaggttgcattaacgataaaa
ttaccaaagccagaaagtaatgattgcagtgaagagaacaccactggtatgtggaaagtc
gaatgttccaatggatcagatggcgatattcagaagttgaaaattagtttgaggcgttcg
cctaaggatttactaagagaacaagctgctgaagctaaatattcagctgaaagaagagaa
aaagaagaagctgctagcagttcaacaaacccatctatgttagatggtagtgtaacaaat
tatttagaacagtttggaagtactgtggctgttgaagaaagtgaacaaaacatagttgat
tctagtgagcaagttcaagttgttatcccttcaaatgaagaaaatattgataatgatcaa
atagacagtgttgaagtatcatctgaatttataacatccaaagaagaacctattgtagaa
aatataactattaatgaaaatgcagttaatgtaactcaagttgaagaaaatacaattcat
gaagaagttttagaacctgctgctattacggtagagtcaactaatcctacaaattcatct
gaagatttttcagactctacagtccgtccatccattgatgaatgtaatgtttcagaacct
attttagaagaaaactctgttaatgtttcagaacctgttttagaagaaaactctgttaat
gtttcagaagttattgatactccaatagctttgagtgaaacgattcaggatattgttcca
gaatccattgaaaatgtagtagatgaaccaagttcatctgaagtcttagaaagtgtatca
aatgttgacataaataaaatacctaataatacaataatagaagaggtcaataaatctgat
tatattaatgattcagaacaaatggaagatgttgtacaattaactgttgaatcaccagat
ttagttgacgatgaagatcctaaactaattgatgacgaacctaaaccagtctatgaagaa
gaattgaattcagttgatgtaagtaaaactgaatcagtcgatgaaataaaacctatacca
attaatgaagatgcatctaaactagtagatagtgaagaaactaaatcaattgaagaatct
tataatgtttcatcatcagatatacctaatttaaaacaggttgacgctgagaaagaatta
aatgaaatgccaaaaccattgtcttcacaccctaaacgtaaatggggctcttgtaaaaca
agaacgcctataacgataagtccatttactttgggtactataatagaatccaatggggat
tttaatgctgataatggtgagtatcgatcagaagaaggagaaatacaaaggacagattca
gatgaagaacaagatgttgaagaacctatggaacttaatgatactatgttaattgatcat
gaagcggttgattatgaagcaccagaagaagaagaaaaacctttcatagataatgatgat
aataaatctgataaatcattagtagaagaaaaatatgaagaagagccaaaaaaaaaatct
tctgtaaagcgtataacaacttctagtgtaattcgtattacaaaccttgttaggccattc
acggttggtcaactaagagatttgttacaaagaactggaaaaattgtttctaatggattt
tggatggatacaattaaatcccaatgtattgttgagtatgaaaatgaagagcaagccatt
gaaactgtatatgcactcaatgattcccaatggccttcaaccaatcccaaatttttaaga
gttgtttttactaataaagatgaattaaataaagctttgaatggaactcacccagaacga
ttagataaacaaaaagagtctaaagtagagaaacttagaacacaggtagataataatttt
attttacgcgaatgggatagaggtaagttggaagatatgaatggtgaaaaagatgataaa
tctattaaaagaaaaatatctgatgatgatcttcatgttacaaaggataaaaagtttaga
aaagatgaaaaagatcaacatgataaacgtaagaagtcaaaatccaaaacaccagaacgt
attcctactaaaagtttagacgagctttttcgaaagaccaaaactactccaactctttat
tggtctcctctttctatggaacagattgcagagaaagaagaccaacgacgtaaacatctt
gcggagatggaacggtctcaaaagactgaccgtaggagaagagataaccttcattatcct
aagagacgttag
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