Aphis gossypii (cotton aphid): 114132775
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Entry
114132775 CDS
T05869
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114132775
09123 Folding, sorting and degradation
03018 RNA degradation
114132775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
114132775
03041 Spliceosome [BR:
ags03041
]
114132775
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114132775
mRNA degradation factors
5'-3' decay
Lsm complex
114132775
Spliceosome [BR:
ags03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114132775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
114132775
NCBI-ProteinID:
XP_027854151
LinkDB
All DBs
Position
1:complement(85331598..85333730)
Genome browser
AA seq
134 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRFWRLPECY
IRGSMIKYLRIPDEIFDMVKEDIVVNKARGRTDNQKNRGGSRGARQGFGGRGGGGNNRGT
GQQQRGGPKSFRGK
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctttcattactcaaaactgctcagaatcacccaatgttggtggaattaaaa
aatggtgaaacatacaatggccatttagtgacatgtgatagttggatgaatatcaattta
agagaagttatctgcacatctaaagatggtgatagattttggagacttccagaatgttat
attagaggcagtatgattaaatacttaagaataccagatgaaatatttgatatggtaaaa
gaagatatagttgtaaacaaagctcgtggtcgaacagataaccaaaaaaatcgtggagga
tctagaggagctagacaagggtttggaggaagaggaggcggtggtaacaaccgtggaact
ggacaacaacagagaggtggcccaaaaagttttagaggaaaataa
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