Aphis gossypii (cotton aphid): 126548832
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Entry
126548832 CDS
T05869
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2 isoform X1
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03018
RNA degradation
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126548832
09123 Folding, sorting and degradation
03018 RNA degradation
126548832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
126548832
03041 Spliceosome [BR:
ags03041
]
126548832
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126548832
mRNA degradation factors
5'-3' decay
Lsm complex
126548832
Spliceosome [BR:
ags03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126548832
Complex C
U2 snRNP components
126548832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
126548832
NCBI-ProteinID:
XP_050066375
LinkDB
All DBs
Position
Unknown
AA seq
113 aa
AA seq
DB search
MVPTYCKFVIFNKIVRLTSKMLFYSFFKTLVGHEIIVELKNDICVTGRLHSVDQFLNIKL
IEVCVSDPEKYPYMNYISESFIRGSVVRYVQLPVNSVDSQLLQDAARKEITIR
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggtacctacctactgcaagtttgttattttcaataaaattgtccgtttgacttcgaaa
atgctattctactcattttttaaaacacttgtggggcatgaaattatagttgaacttaag
aatgacatctgtgtcactggaagattgcattctgttgatcaatttttaaatatcaaactt
atagaagtctgtgtaagtgatccagaaaaatacccatacatgaattatatatcagaatct
ttcatcagaggttcagttgttcgatatgtacaacttccagttaattctgttgattcacaa
ttgttacaagatgctgctcggaaggaaattaccattcgataa
DBGET
integrated database retrieval system
