Aphis gossypii (cotton aphid): 126550453
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Entry
126550453 CDS
T05869
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03008
Ribosome biogenesis in eukaryotes
ags03013
Nucleocytoplasmic transport
ags03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126550453
03015 mRNA surveillance pathway
126550453
03008 Ribosome biogenesis in eukaryotes
126550453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ags03019
]
126550453
03009 Ribosome biogenesis [BR:
ags03009
]
126550453
Messenger RNA biogenesis [BR:
ags03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126550453
mRNA cycle factors
Stress granule specific factors
126550453
Ribosome biogenesis [BR:
ags03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
126550453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
Tap-RNA_bind
NTF2
LRR_4
LRR_8
DUF6608
UBA_4
Motif
Other DBs
NCBI-GeneID:
126550453
NCBI-ProteinID:
XP_050058015
LinkDB
All DBs
Position
1:complement(81856212..81861997)
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AA seq
769 aa
AA seq
DB search
MTSRSRERNAINRFHNINSRSERYNEYDDRNTRPCTRGFDRYSDRHGYKKKVTFKANNNG
GNQYRKSWDCKTDLVRDQLDGEFSFRNGPSRNNARRRSFPERNLERSGHCNFRNLRSLKE
SSTGWYSVFVPNVEDSDEVLQIIQTYIKPVILYPYNKQYFDNALRFLVDDYKVANALHNT
SYKIKQRNDRKLIIKVLPYLPPRGPISFTPVSNEVREKMIEAMATRYNPSTKSLDLSRFY
TCPLFTDNQLFVPLNRPAVLLAALNIVAQHTKHDLYGLSLENNHIYLGEGLVWIRRLFPE
LKVLDLAGNKFSDLKELKCLSGYNIEVLNLQGNPLCDTVDKERYKWNLQQFFPMLIKLDN
SELPSRYSTIGTKFKMPIHLGNCYPIPEGHNPELPNPVMSLVESFLTQYYERFDNQVSRQ
MVSEAYHENATFTLSSILLFKNVKGNLSQYLPESRNFLRTDRHKHEKRRYLHKGKENIIN
FLDKLPKSKHDLDSFIVDIPLANAAMVQIVLNGVFAEDFEETNYRHVFRSFSRTFCIVPV
ESGWRIISDMLFITTVNDELLLESSKRFHIFKPKPISSKRINSNGNSIQNLTMFMEDTDE
MAGMKLSSSYQHPSTSSYSPISFQQPTFSSYQPSSMTAPMNPQQSSPYQGGMSTSTPQIQ
QMAPVATVNFQPDSQQQPTASFNMFNTISPSTPASFPVNQLSNERPVNLTSDVNANPDKM
TMVKSFSNESGMNNEWAKKCLEDNGWDYARAATCFLELKAKIPPAAFIH
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgactagtagatcgcgagaacgtaatgccattaacagatttcacaacatcaattctcgt
agtgaacgttataatgaatatgatgatcgaaatacaagaccttgcactagaggatttgat
agatactcagatcgtcatggttataaaaaaaaggtgacattcaaagcaaacaacaatgga
ggaaatcaatatcgtaaaagttgggattgtaaaactgacctggttcgtgatcaattggat
ggtgaattttcttttcgaaatggaccatcaagaaataatgctcgccgaaggtcttttcct
gaaagaaatcttgaacgaagtggtcattgtaacttcagaaatttacggtctttaaaagaa
agtagtactggatggtactcagtatttgtgccaaatgttgaagatagtgacgaagtttta
caaataatacaaacgtatatcaaaccagttatactatatccatataataaacaatatttc
gataatgcattaagatttcttgttgatgattataaggttgctaacgcattgcacaacact
agctataagataaaacaaagaaatgatcgaaaattaattataaaggtgttaccatatttg
cctccacgtggtcctatatcattcacaccagtatccaatgaagtaagagagaaaatgata
gaagcaatggcgacccgctacaatcctagtaccaagagtttggatttgtcacgtttttat
acttgtccattatttaccgacaaccaactgtttgtaccattaaatcgaccagcagttctt
ttagcagcactgaatatagttgctcaacacaccaaacatgatttgtatggcttaagtctt
gaaaataatcacatttatttaggggaaggtcttgtatggatacgtagattgtttcctgaa
ctgaaagtgttggatttggctgggaataaattttctgatttaaaagagttaaagtgtctt
tctggttataatattgaagtgctgaacttgcaaggaaatcctctgtgtgatacagtagac
aaagagcggtacaaatggaacttacaacaattttttcctatgctgattaagttggataat
tcagaactgccatctcgatacagtacaattggaaccaaatttaaaatgccaattcacttg
ggtaattgttacccaataccagaaggccataaccctgaactaccaaatcctgtgatgagt
ttagttgaatcttttctcactcaatactatgaacgtttcgataatcaagtgtccagacaa
atggtttcagaagcttaccatgaaaatgccacatttacattatccagcattttactattt
aaaaatgtcaaaggtaatttatcacagtatttgcctgaaagtagaaattttttaagaact
gacagacacaaacatgaaaaacgtcgttatttacataaaggcaaagaaaacataattaac
tttcttgataaattacctaaatccaagcatgatcttgactcatttatagttgatattcca
ttggcaaatgctgcaatggttcagattgtactgaatggtgtatttgctgaagactttgaa
gaaaccaactataggcatgtattccgatcattctctagaacattctgtatagtgccagtt
gaaagtggttggagaataattagtgatatgttgtttataacaacagtcaacgatgagtta
ttattagagtcttcaaaacgattccatattttcaaaccaaaaccaatatcatccaaaaga
attaattctaatggcaatagtatccaaaatttaacaatgtttatggaggatactgatgaa
atggctggcatgaaattatcatcatcttatcaacacccatctacatccagctactcacca
atatcttttcagcaacccacattttcatcatatcagccttcatcaatgactgctcctatg
aatccacagcagtcatcaccctatcaagggggcatgtcaacatctactccacagatccaa
caaatggcacctgttgctactgtaaatttccaaccagactcacaacagcagccaactgcc
tcatttaatatgtttaacacaatatcaccttcaactcctgcctccttccctgtaaatcaa
ttatctaatgaaagacctgtaaatttgaccagtgatgttaatgcaaatcctgataagatg
actatggttaagagtttttcaaatgagtctggaatgaataatgaatgggctaaaaagtgt
ttagaagataatggatgggattatgctagagctgccacatgttttttagaactaaaagcc
aaaattccacctgcagctttcattcattaa
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