Aphis gossypii (cotton aphid): 126551331
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Entry
126551331 CDS
T05869
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126551331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ags03041
]
126551331
Spliceosome [BR:
ags03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126551331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
PRP4
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_like
Ge1_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_ACSF4
Beta-prop_WDR75_2nd
Mto2_bdg
Motif
Other DBs
NCBI-GeneID:
126551331
NCBI-ProteinID:
XP_050060341
LinkDB
All DBs
Position
3:complement(12295899..12298628)
Genome browser
AA seq
507 aa
AA seq
DB search
MSDDEEITYLRKQKTIHYGSLEDQERIRLSTLTATDSDGEPKAVGGNINVSNEHFDLEDA
MSKDKQALLEEFERKKKARHVQVSTDDDEVKKNLRKLGQAICLFGEGPAERRNRLRELLS
RVGEDVVAKKPEEEKEKRQQIKDQDTTWYHEGPPSLLDARLFMAEYSLLKAHFRLKSLRE
EASIPESTLTARLQDLHKYTTSLSIYCSQIGDTRPISYCRFSPNSQYIATSSWSGLCKLW
SVPDCTLVKTFRGHNCNVCSITFNPHACSTGNVLDLASCASDGSVKLWSMNSEKEEPIAD
LEGHAPFRVSRADFHPSGRFLGTCCFDNSWRLWDLEQAEEVLHQEGHCKPVYCMSFQCDG
SIVATGGLDAFGRVWDLRTGRCIMFMEGHLKSIYSIDFSPNGYQMATGSEDNTCRIWDVR
KRACLYTIPAHMSLVSGLRYQPDGHFIVTSSYDNTIKIWANKTWQMLKTLSGHDNKIMGV
DISPDSKYIASSSYDRTFKLWAPEYTT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgaagaaattacttacttaagaaaacaaaaaacaatacattatggttca
ttagaagaccaagaacgtatccgtttatctactttaactgccactgacagtgatggcgaa
ccaaaagctgttggaggaaatatcaacgtgtccaatgaacattttgatttggaagatgct
atgtctaaagacaaacaagcattacttgaagaattcgaacgtaaaaaaaaagcccgtcac
gtgcaagtctctactgatgatgatgaagttaaaaaaaacctcaggaagcttggacaagcc
atatgcttgtttggggaaggaccggcagaaagaagaaatagattgcgagaactactttca
agagtaggagaagatgttgtagcaaaaaaaccagaagaagaaaaagagaaacgacagcaa
atcaaagatcaagatacaacctggtaccatgaaggaccaccttcactgctagatgcacgc
ttatttatggcggagtattcattgttgaaagcacattttcgtttgaaatcgctcagagag
gaagctagcatacctgaatcaacacttacagctcgcttacaagatttacacaaatataca
acatctctttctatttattgtagtcaaattggtgatactagaccaatatcatactgccgg
tttagtcccaattcccaatatatagctacatcatcttggagtggtttgtgtaaattatgg
tcagttcctgattgtacattagtcaaaacatttagaggacataattgtaatgtctgctct
atcacatttaatccacatgcctgcagtactggaaatgttttagatctagcgtcatgtgcc
agtgatggttctgttaaactgtggtcaatgaatagtgaaaaagaagaaccaatagcagac
ctggaaggtcatgcaccatttagagtttcgagagcagattttcatccatctggtcgattt
ttaggaacttgctgttttgataattcttggcgattatgggatttagaacaagcggaagaa
gttctccatcaagaaggacattgtaaaccagtttattgtatgtcgtttcagtgtgatggg
tcaattgttgcaactggaggcctggatgcttttggacgtgtttgggatttgcgcacagga
agatgtattatgtttatggaaggtcatttaaagtctatatacagtatagacttttctccc
aatggttatcaaatggccactggtagtgaagataacacatgtcgtatttgggatgttaga
aaaagagcatgtttatacactattccagcacacatgagtcttgtttcaggactgagatat
caacctgatggtcattttatagtcacttcctcatacgacaacacaatcaagatatgggca
aataaaacatggcaaatgttaaaaacgctatctggacatgacaacaaaataatgggagtt
gacatatctccagattcaaaatatatagcatcttcatcatatgatagaacatttaaatta
tgggctcctgaatacacaacataa
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