Aphis gossypii (cotton aphid): 126552088
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Entry
126552088 CDS
T05869
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126552088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ags03041
]
126552088
Spliceosome [BR:
ags03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126552088
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
PRP4
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
eIF2A
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
Ge1_WD40
WD_LRWD1
DUF5960
Beta-prop_WDR75_2nd
Mto2_bdg
Motif
Other DBs
NCBI-GeneID:
126552088
NCBI-ProteinID:
XP_050062534
LinkDB
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Position
X:complement(9430369..9436370)
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AA seq
481 aa
AA seq
DB search
MESSENVRFIFGLLDDINEQINSRNAEYFDLEDAMSKDRQALLEEFERKKKARHVQVSTD
DDEVKKNLRKLGQAICLFGEGPAERRNRLRELLSRVGEDVVAKKPEEEKEKRQQIKDQDT
TWYHEGPPSLLDARLFMAEYSLLKAHFRLKSLREEASIPESTLTARLQDLHKYTTSLSIY
CSQIGDTRPISYCRFSPNSQYIATSSWSGLCKLWSVPDCTLVKTFRGHNCNVCSITFNPH
ACSTGNVLDLASCASDGSVKLWSMNSEKEEPIADLEGHAPFRVSRTDFHPSGRFLGTCCF
DNSWRLWDLEQAEEVLHQEGHCKPVYCMSFQCDGSIVATGGLDAFGRVWDLRTGRCIMFM
EGHLKSIYSIDFSPNGYQMATGSEDNTCRIWDVRKRACLYTIPAHMSLVSGLRYQPDGHF
IVTSSYDNTIKIWANKTWQMLKTLSGHDNKIMGVDISPDSKYIASSSYDRTFKLWAPEYT
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggagtccagtgaaaatgtccgtttcattttcggcttgctggacgatataaacgagcaa
atcaactccagaaatgctgaatattttgatttggaagatgctatgtctaaagacagacaa
gcattacttgaagaattcgaacgtaaaaaaaaagcccgtcacgtgcaagtctctactgat
gatgatgaagttaaaaaaaacctcaggaagcttggacaagccatatgcttgtttggggaa
ggaccggcagaaagaagaaatagattgcgagaactactttcaagagtaggagaagatgtt
gtagcaaaaaaaccagaagaagaaaaagagaaacgacagcaaatcaaagatcaagataca
acctggtaccatgaaggaccaccttcactactagatgcacgcttatttatggcagagtat
tcattgttaaaagcacattttcgtttgaaatcgctcagagaggaagctagcatacctgaa
tcaacacttacagctcgcttacaagatttacacaaatatacaacatctctttctatttat
tgtagtcaaattggtgatactagaccaatatcatactgccggtttagtcccaactctcaa
tatatagctacatcatcttggagcggtttgtgtaaattatggtcagttcctgattgtaca
ttagtcaaaacatttagaggacataattgtaatgtctgttctatcacatttaatccacat
gcctgcagtactggaaatgtcttagatctagcgtcatgtgccagtgatggttctgttaaa
ctgtggtcaatgaatagtgaaaaagaagaaccaatagcagacctggaaggtcatgcacca
tttagagtttcaagaacagattttcatccatctggtcgatttttaggaacttgctgtttt
gataattcttggcgattatgggatttagaacaagcggaagaagttctccatcaagaagga
cattgtaaaccagtttattgtatgtcgtttcagtgtgatgggtcaattgttgcaactgga
ggcctggatgcttttggacgtgtttgggatttgcgcacaggaagatgtattatgtttatg
gaaggtcatttaaagtcaatatacagtatagacttttctcccaatggttatcaaatggcc
actggtagtgaagataacacatgtcgtatttgggatgttagaaaaagagcatgtttatac
actattccagcacacatgagtcttgtttcaggactgagatatcaacctgatggtcatttt
atagtcacttcctcatacgacaacacaatcaagatatgggcaaataaaacatggcaaatg
ttaaaaacgctatctggacatgacaacaaaataatgggagttgacatatctccagattca
aaatatatagcatcttcatcatatgatagaacatttaaattatgggctcctgaatacaca
acataa
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