Agrobacterium sp. 33MFTa1.1: EYD00_00230
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Entry
EYD00_00230 CDS
T05906
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
agt
Agrobacterium sp. 33MFTa1.1
Pathway
agt00300
Lysine biosynthesis
agt01100
Metabolic pathways
agt01120
Microbial metabolism in diverse environments
agt01230
Biosynthesis of amino acids
Module
agt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EYD00_00230
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agt01002
]
EYD00_00230
Enzymes [BR:
agt01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
EYD00_00230
Peptidases and inhibitors [BR:
agt01002
]
Metallo peptidases
Family M20
EYD00_00230
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Gene cluster
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Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QBJ11990
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Position
circular:complement(46039..47235)
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AA seq
398 aa
AA seq
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MTTTDPVANLAALIRCPSVTPAEGGALTLLDNLLSPLGFVVEKMVASEAGTPDVENLYAR
LGNEGPHLMFAGHTDVVPVGDEAAWSHPPFAAEIAGGEMFGRGAVDMKGGIACFVAAIAR
HIEKHGKPQGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGDMI
KIGRRGSLSGRITVHGVQGHAAYPHLADNPIRGLLQLTHALMHPPFDHGTDNFQPSNLEV
TTVDTGNAATNVIPARATASFNIRFNDTWTAESLRAEIIRRLDAAAADGELRPDRTPVKY
EIVWADRPAHVFLTRNNALISSLSGAVEAVTGKEPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAIADLETLTRIYETFIERWFAHADGK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgatcccgttgccaatctcgccgccctcatccgttgcccttcggtgacg
cctgcggaaggcggcgcgcttactctgctcgacaacctgctttcgccgctcggtttcgtg
gtggaaaaaatggtggcgagcgaggcgggaacacccgatgtagagaacctctatgcccgt
ctcggcaacgaggggccacatctgatgtttgcgggccatacggatgtggttcccgttggg
gatgaggccgcgtggagtcacccgccttttgccgcagagattgccggtggcgaaatgttc
ggtcgcggtgcggtggacatgaagggcggtattgcctgttttgttgccgccattgcccgc
catattgaaaaacacggcaagccgcagggctccgtctccttcctgatcaccggtgacgag
gaaggcccatcaatcaacggcacttccaagctgctggaatgggctgctgcaaagggcgag
acgtgggacgcgtgtgtcgtcggggaaccgaccaatcccgaccagctgggcgacatgatc
aagatcggccggcggggatcgctctccggtcgcatcacggtccatggcgtgcaaggccac
gctgcctatccgcatctcgccgacaacccaattcgcggtctgctgcagttgacgcatgcg
ctgatgcatccgccctttgatcacggcacggataatttccagccttccaatctcgaagta
acgaccgtcgacaccggcaacgccgccaccaatgtgatcccggcgcgggcgactgcctcc
ttcaacatccgtttcaacgacacatggacagcggagagccttcgggcggaaatcatccgc
cgcctcgatgccgctgcggcagacggcgagctccgccccgaccgcacaccggtaaagtac
gagatcgtctgggcggaccgaccggcccatgtctttttgacccggaacaatgcgctcatc
tcatcgctctcaggcgcggtcgaagccgtcaccggcaaggagccaaagctttcgaccacc
ggcggcacgtcggatgcgcgcttcatcaaggactattgccctgtcgtggagttcggcctt
gtcgggcagaccatgcacatggtcgatgagcgggtagccattgccgatcttgagacgctg
acgcgcatttacgaaacctttatcgagcgctggttcgcccatgccgacggcaagtga
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